Malus domestica (apple): 114826097
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Entry
114826097 CDS
T03194
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114826097
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114826097
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114826097
NCBI-ProteinID:
XP_028961700
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All DBs
Position
07:join(26976116..26976242,26977201..26977552,26977640..26977850,26977931..26977999,26978245..26978481)
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AA seq
331 aa
AA seq
DB search
MASLPYAEVDFSLRSMAGRAEGFGRFAIGGLNGPVYFVTTLADDGPGSLREGCRKQEPLW
IVFEVSGTIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHIIVCNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCCFAQHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASIESQIYSQCNIYEA
GNKKKTFEYYTEKAADREVAKSGFIISEGDLFLNGAQPCTLTGFSEECLFHPSEFYPQWT
MEAASDSLKAILQILTGWQSIHRPAEQVVTV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctaccgtacgccgaagtggattttagcctgagatcaatggccggtcgggcc
gagggctttggccggttcgccatcggaggcctcaacgggccggtctatttcgtcaccacg
ttggcagatgatggtccaggctcacttcgtgaaggatgccgaaaacaagaaccactctgg
attgtctttgaggtttctggcaccattcacctttcatcttacttgagcgtgtcgtcttat
aagacaattgatggacgaggtcagaggataaagctcacgggaaagggacttaggctcaag
gaatgtgagcatataattgtatgcaacctcgagtttgaaggtggtagaggacatgatgtt
gatggcattcagattaaaccgaactctaggcacatatggatagaccgatgcagccttcgt
gattatgatgatggactcatagatatcaccagacaaagtacagacataactatctctaga
tgttgctttgcacaacatgacaagacgatgcttattggagcagacccctcgcacgttggt
gacagatgcattcgggtgacaatccatcattgtttttttgatggaacaaggcaaagacaa
cctcgtcttagatttgggaaagttcatctttacaacaattacactcgaaactggggtata
tatgccgtttgcgccagcatagaatcccagatatactctcaatgcaacatttatgaagca
gggaataagaaaaaaacctttgaatattatacagaaaaggcagcagacagagaagtggca
aagtctggcttcataatatccgagggcgatctattcctcaatggagctcaaccatgcaca
ttgacagggttcagtgaagaatgcctgttccatccaagtgaattttatccacagtggact
atggaagcagcctcagattctcttaaagccattctccaaattcttactggctggcaatcc
attcatcggccagcagagcaggtggtaactgtatga
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