Malus domestica (apple): 114826823
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Entry
114826823 CDS
T03194
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114826823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
114826823
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
114826823
Prokaryotic type
Archaeal type
TFB
114826823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
DUF5817
DUF5937
Motif
Other DBs
NCBI-GeneID:
114826823
NCBI-ProteinID:
XP_028963419
LinkDB
All DBs
Position
09:4082128..4083087
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AA seq
319 aa
AA seq
DB search
METDEQLCSDCKKYTQVVIDHRSGDTICTDCGLIVEAFSIDVTAEWRNFADKDPKEDRAR
VGASLNPLLDNGILTTCISQEKKQNKNKDNAEGVVPPNNRLNNVETSNPQMSLAKATEHL
EAMACRLDNHGLPEGVLYDAKVLYKKAVDKKICRGRKFGAMMAACLFLACQENHSSRTPK
EIAGAANGPSMKEITKMVKLLKEELELVSKATDAGDLWRRYCSNLGMNSIQDRKAVEETL
KNLAKLDIRRSPTSVVAAVLYMIVKLASNGKTVEDVQQETGASVGTIKSTYKEIYPYAST
IVPNWYCKYLEDIKNLNTR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatgaacagttatgttcagattgcaagaaatacacacaagttgtgattgac
caccggtccggtgacacgatctgcaccgactgtggtttgattgttgaagccttcagcatc
gatgtcaccgccgagtggcgaaattttgcggataaggatcccaaggaagaccgggctcgc
gtcggtgcatccttgaatcctttgctggataatggcattcttaccacttgtatttcccaa
gaaaagaagcaaaacaagaacaaggataacgccgaaggcgttgttcctccaaataaccgg
ttgaataacgttgagacgtcgaaccctcaaatgtctctcgcaaaagctacagaacacctc
gaagccatggcttgccggctagacaatcatggccttcccgaaggcgtactctatgatgcc
aaagtgttatacaagaaggccgttgacaagaagatctgcagggggagaaagtttggtgct
atgatggcggcttgcctgttccttgcttgccaagaaaaccatagttcgcgaacaccaaag
gaaatcgccggggctgccaatggaccctccatgaaagaaattaccaagatggtaaaattg
ttgaaagaagagctggagctcgtttccaaagctacagacgctggggacctatggcggcga
tactgctcgaatcttggcatgaacagtattcaggatcggaaggctgtggaagagactctg
aagaacttggcgaagcttgacataaggagaagccctacatctgttgtggcagcggttctg
tacatgatagtgaagcttgcttccaatggcaagactgttgaagatgtccagcaagaaact
ggtgcttccgtggggacgattaaaagcacatacaaggagatttatccctatgcttcaacg
atagtacccaactggtactgcaagtacttggaggacatcaagaatctgaacactcgttga
DBGET
integrated database retrieval system
