KEGG   Malus domestica (apple): 114826915
Entry
114826915         CDS       T03194                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
mdm  Malus domestica (apple)
Pathway
mdm04120  Ubiquitin mediated proteolysis
mdm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114826915
   04120 Ubiquitin mediated proteolysis
    114826915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    114826915
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114826915
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  U-box type E3
   114826915
SSDB
Motif
Pfam: Ufd2P_core U-box DUF6730
Other DBs
NCBI-GeneID: 114826915
NCBI-ProteinID: XP_028963675
LinkDB
Position
09:complement(join(3998856..3999035,3999129..3999218,3999295..3999459,3999540..3999632,4000039..4000161,4000311..4000406,4000500..4000703,4000826..4000915,4001035..4001149,4001236..4001348,4001452..4001655,4002171..4002323,4002491..4002743,4002826..4002977,4003181..4003385,4003917..4004758))
AA seq 1025 aa
MATPKRQRSREELEDIVLRKIFLVSLTGPSDSDSRVVYLEMTAAEILSEGKELRLSCDLM
ESILIDRLSGSFPAAELPFQYLIGCYKRAYDEGKKIASMKDRNLKSELESVVRQAKKLSV
SYCRIHLGNPESFPNPNFDSNKPNASPLLPLIFSEGGGSADGFGGSGSSGGIQCPPGFLE
EFFTDSDFDSLDPILKGLYEELREIVLKVSALGNFQQPLRALYFLVKLPVGARSLVNHPW
WIPKGVYLNGRVIERTSILGPFFHVSALPDHPIFKSQPDVGQQCFSEASTRRPADLLSSF
ATIKTVMNNLYDGLTEVLLLLLKNADTRENVLEYLAEVINKNSSRAQIQVDPLSCASSGM
FVNLSAVMLRLCEPFLDANLTKRDKIDPKYVFYSNRLELRGLTALHASSEEVTEWINKAS
MGNTDGETRLLQSQEATSSGNSVNVKPNSEKAKYSFICECFFMTARVLNLGLLKAFSDFK
HLVQDISRSEDTLTTLKAMQGQTSSPQLEIDIARLEKEIESYSQEKLSYEAQILRDPTVI
QSALTFYRLMVVWLVRLVGGFKMPLPSTSPTEFASMPEHFVEDAMELLIFASRIPKALDG
VLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRGSGSSITATLFEGHQLSLEYL
VRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWHVPSHRNAWKQIAKEEEKGVYL
NFLNFLINDSIYLLDESLNKILEHKELEAEMSNTAEWERRPAQERQERTRLFQSQENIIR
IDMKLANEDVSMMAFTTEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKY
EFRPKQLLKQIVYIYVHLAKGDSENIFPAAISKDGRSYNEQLFSAAADVLRKIGEDGRII
QEFIELGAKAKVAASEAMDIEAILGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQR
HLLSDSSDPFNRSHLTADMLIPDNELKARIQEFIRSQESKKRGEDLSTQSSKATIQTTTS
EMLID
NT seq 3078 nt   +upstreamnt  +downstreamnt
atggcgaccccgaaacgccagcggtcccgggaggagttggaggacatagtcctccgcaaa
atctttctcgtatcgctgaccggtccatcggactccgattcccgagtcgtttacttggag
atgactgcggcagagattctcagcgaggggaaggagttgaggctcagttgcgacctcatg
gaatcgattctaatcgatcggctatccggcagcttccccgctgctgaactgccgttccag
tacctgatcgggtgttacaaacgcgcctacgacgagggtaagaaaattgcttccatgaaa
gataggaacttgaagtcggaattggaatccgtggttaggcaagcgaagaagctttcggtt
tcgtattgtaggattcatttggggaatcccgaatcgttccccaacccgaatttcgattcg
aacaagccgaatgcctcgcctttattgccattgatcttctcagagggtggcggttcagct
gatgggtttggaggaagtgggagtagtgggggaattcagtgcccacctgggtttttggag
gagttcttcaccgactccgatttcgatagcttggacccaattttgaagggattgtatgag
gagcttagagagattgtgcttaaggtttcggccctcggaaacttccagcagccactgagg
gctctgtattttttggttaagttgccggttggtgcaaggtcacttgtgaatcacccgtgg
tggattccaaaaggggtgtacttgaatgggcgtgtgattgagaggactagcattttgggt
cctttttttcatgtcagtgctctgcctgatcatcctattttcaagagccagcctgatgtt
gggcagcagtgcttttcagaagcttcaactcgtagaccagctgatctgctatcttcattt
gccacaattaagacagtcatgaataacttatatgatggccttactgaagttcttctctta
ctactgaaaaatgctgacacccgtgagaatgttcttgagtatcttgcagaggtgatcaac
aaaaactcatcaagggctcagattcaggtagatcctctttcatgtgcaagttcaggcatg
tttgtcaatctcagtgctgtcatgcttcggctttgtgagccgtttttagatgcaaattta
acaaaaagagacaaaattgatccaaaatatgtattctacagtaaccgtttggagttaaga
ggtttgactgctttacatgcatcgtctgaagaagttactgaatggattaataaagctagt
atggggaatactgatggtgaaactcgccttttacaatctcaagaagccaccagttccgga
aatagtgtcaacgtgaagccaaatagtgaaaaagctaaatattcatttatttgcgaatgc
ttcttcatgactgcaagggtgctcaatctgggattgttgaaagcattttctgactttaaa
catttagtacaggacatttcaaggtctgaagatactctcaccacacttaaagccatgcaa
ggccagacatcttctccacaattggagatagatatagctcgccttgagaaggaaatagag
tcatattcgcaggaaaagctttcttatgaagctcagatattaagggatccgacagttata
cagagtgctcttactttctatcgtttgatggtggtgtggctagttcgcttggttggtggg
tttaaaatgcccctgccatcaactagccctacggagtttgcttctatgccagagcatttt
gtggaagatgccatggagttgcttatatttgcttcccggattccaaaagccttggatggg
gttttgttggatgattttatgaacttcattataatgtttatggccagcccagaatatatc
aggaacccttacctaagagcaaagatggttgaagtcctaaactgctggatgccccgtgga
agcggatcatctattacagcgaccctatttgaagggcaccaactatctcttgagtatctt
gtgaggaatctcttgaagctatatgttgacatcgagttcactggttctcacacacagttc
tatgacaagtttaatattcgccacaatattgctgaacttcttgaatatctgtggcatgtc
cctagtcatcgaaatgcttggaaacagattgcaaaggaagaggagaagggtgtttacttg
aatttcttaaacttcttgatcaatgatagcatctatcttctggatgaaagtcttaacaaa
attcttgaacacaaagaactggaagctgagatgtcaaacactgcagagtgggagcgcaga
cctgctcaagaaaggcaggagagaacacgcctcttccagtctcaagagaatattatccga
atagatatgaagttagcaaatgaagacgttagtatgatggcatttactacagaacaaatt
acagctcctttcctacttcctgagatggttgaaagggtggccagcatgctcaattacttt
ttgttgcaattagtaggccctcaaagaaaatctcttagcttgaaagaccctgagaagtat
gaattccgtccaaagcaattgcttaagcagattgtatacatatatgttcatttggcaaag
ggtgattcagaaaatatatttccagctgccatctcaaaggatggtcgttcgtacaatgag
cagttatttagtgctgcagcagatgtcctaaggaaaattggtgaagatgggaggatcata
caagagtttattgagctaggtgcgaaagccaaggttgctgcttcggaggccatggacatt
gaagctattcttggggacataccagatgaattcctcgatccaattcagtacactttaatg
aaggatccagttatcttaccttcttcaagaatcacagtagaccgacccgtcattcaaagg
catcttcttagtgatagttctgatccgttcaaccgatcccatcttactgcggacatgctg
ataccggacaatgagttaaaggcaaggatacaagagttcattaggtcccaagaatcgaag
aagcgcggggaagacttgagcacgcagagctccaaggcaacgatacaaactacaactagt
gaaatgctaattgattag

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