Malus domestica (apple): 114827606
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Entry
114827606 CDS
T03194
Name
(RefSeq) tubulin alpha chain-like isoform X1
KO
K07374
tubulin alpha
Organism
mdm
Malus domestica (apple)
Pathway
mdm04145
Phagosome
mdm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114827606
09142 Cell motility
04814 Motor proteins
114827606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
114827606
03036 Chromosome and associated proteins [BR:
mdm03036
]
114827606
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mdm04812
]
114827606
04147 Exosome [BR:
mdm04147
]
114827606
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114827606
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
114827606
Cytoskeleton proteins [BR:
mdm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
114827606
Exosome [BR:
mdm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114827606
Exosomal proteins of other body fluids (saliva and urine)
114827606
Exosomal proteins of colorectal cancer cells
114827606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
114827606
NCBI-ProteinID:
XP_028965533
LinkDB
All DBs
Position
10:join(20362741..20362833,20363851..20364456,20364555..20365208)
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AA seq
450 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEADEGEDDGEDEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatttcgatccacatcggccaggctggtatccaggtcggcaatgcctgc
tgggagctttactgccttgagcatggcatccagcctgatggccaaatgcctagtgacaag
tccgtcggtggaggtgatgatgccttcaacaccttctttagtgaaactggagctggaaag
catgtgcctcgcgctgtgtttgttgatcttgagcccactgtcattgatgaagtgaggacc
ggaacttaccgccagctcttccaccctgagcaactcattagtggcaaggaagatgctgcc
aacaactttgcccgtggtcactacaccatcggcaaggagattgttgatctctgcttggac
cgcatccgtaaacttgctgacaactgcactgggcttcaagggttccttgttttcaatgct
gttggtggaggaactggctctggtcttgggtcccttcttttggagcgtctctctgttgac
tatggaaagaagtcaaagcttgggttcaccgtgtatccatctccacaggtttctacatct
gtggttgagccctacaacagtgtcctctcaacccactccctcctggaacacactgatgtt
gcagtgctccttgacaacgaggctatctatgatatctgcaggcgctctcttgacattgag
cgacccacctacaccaacctcaaccgccttgtgtctcaggtaatttcctctttgactgct
tctctgaggttcgatggtgcacttaatgtggacgtgactgaattccagaccaacttggtc
ccataccccagaatccactttatgctttcctcatatgcaccggtcatctctgcagagaag
gcgtaccatgaacaactctctgtggctgaaatcaccaacagtgccttcgagccctcatcc
atgatggcaaagtgtgatccccgccacggcaaatacatggcctgctgtctgatgtatcgt
ggtgacgttgtacccaaggatgtgaatgctgctgttgccacgatcaagaccaagcgtacc
attcagtttgtggactggtgccctactggattcaagtgcggcatcaactaccagccacct
actgttgtcccaggaggcgaccttgcgaaggtgcagagggccgtgtgcatgatctccaac
tcgaccagtgttgctgaggtgttctccagaatcgaccacaagtttgatctcatgtatgcc
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaggaaggagagttctctgaa
gcccgtgaggaccttgctgcccttgagaaggattatgaagaagttggtgccgaggctgat
gaaggcgaggacgatggtgaagacgagtactaa
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