Malus domestica (apple): 139187426
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Entry
139187426 CDS
T03194
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
139187426
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139187426
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_long
PPR_3
Motif
Other DBs
NCBI-GeneID:
139187426
NCBI-ProteinID:
XP_070662874
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Position
10:join(12752456..12753067,12753245..12755125)
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AA seq
830 aa
AA seq
DB search
MLLRRAPELSPSTLSLTHSSSFFSTLCFSNPNLLSMRSSLFPPLSLLRSLTLCLSHNQHH
HPHTHPFSRPMSSFPLSTTKPFRFHALPSSSTSVEHLAGKASDPEENWDLSNVAQSEVFD
FENCFGSADLKHLGAPKLEVPELEELPEQWRRSKLAWLCKELPAHKAGTLSRILNAQKKW
IRQEDATYVAVHCMRIRENDVGFRVYKWMMQQHWYRFDFALATKLADYMGKERKFSKCRD
IFDDIINQGRVPSESTFHILVVAYLSAPVQGCLEEACGIYNRMIQLGGYQPRLHLHNSLF
KALVSQPGTSSKHYLKQAEFIFHNLVTTGLEIHKDIYSGLIWLHSYQDTIDKERMALLRK
EMQQAGIEEGRDVLVSLLRACSKEGDVEGAESTWLRLCDLEVGLPPQAYVYKMEAYSKAG
VPLRSLEIFREMQEQLGSSNAVAYHKVIEVLCKAQEVERVESLMTEFINTGLKNFMPSYI
DLMNMYFNLGLHDKLESAFSQCLERCRPSRTICSIYLDSLVKVGNLAKAEEIFGLMQSDA
AIGVNARSCNTILSGYLSSGDYVKAENIFDLMCQKKYDVEPPLMEKIDYILSLSRKVVKK
PVSLKLSKEQREILVGLLLGGLQIESDEDWKNHMIRFEFSESSSTHSLLKRHIFDQYHEW
LHPSCKSSESTEDIPYKFSTISHSYFAFYAEQFWPKGRRMIPKLIHRWLSPCALAYWYMY
GGHSTSSGDILLKIKGSEEGVEKIVKSLRAKSLDCKVKRKGRVFWIGFLGSSSTWFWKLV
EPYILDDLKYALKGGQISDNSMVETENVNFGSGSDTNENASDYSDNDNNL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcgcagagctccagagctctcaccctccactctctctctaacccactcctcc
tccttcttctccactctctgtttctctaaccctaatctcctctccatgcgctcttcactc
ttccctcctctctctctcctccgttccctcactctctgtctctctcacaaccaacaccac
caccctcatacccatccattctccaggcccatgtccagttttccgctctccaccaccaaa
cccttccggttccacgcccttccctcttccagtacttccgttgaacaccttgcaggcaag
gcctcggacccagaggagaattgggatttgagcaatgtcgcgcagagcgaggttttcgat
tttgagaattgctttggttccgccgacttgaagcacctgggggcgccgaagcttgaggtt
ccagagctggaggagctcccggagcagtggcggaggtcgaagctggcgtggctgtgtaag
gaactgccggcgcataaggccggtaccttgagtcgtatactcaatgcgcagaagaagtgg
ataaggcaagaagatgccacttatgttgccgtgcattgtatgcggattcgggaaaatgat
gtcgggtttcgggtttacaaatggatgatgcaacaacactggtatcgttttgattttgct
cttgctactaagttagcggattacatgggtaaagagcgaaaattctcgaaatgtagggat
atatttgatgatataattaatcaggggcgtgttcctagtgaatctacatttcatatattg
gttgttgcatatcttagtgccccggttcaaggttgcttggaggaagcatgtggcatttac
aatcgtatgattcagctaggaggttatcagccccggcttcacttgcacaattctctcttc
aaagcccttgtcagccaacccggaacctcttcgaaacactaccttaaacaggctgagttt
atttttcataatttggtaacaactggactcgaaattcacaaggatatttatagtggatta
atttggctacatagctatcaggatacaatagataaagaaaggatggcattgttaagaaaa
gaaatgcaacaggctggaattgaggagggcagagatgtgcttgtgtctctcttgagagct
tgctcaaaagagggggatgtggagggagcagaaagtacttggctcagactttgcgatctt
gaagttggtctcccacctcaggcatatgtttataaaatggaagcctattcaaaggctgga
gtgcctttgagatccctggagatattcagggagatgcaagagcagttgggttcgtccaac
gctgtcgcatatcataaagtcatagaggtcttatgtaaggctcaagaagttgaacgtgtc
gagtccctcatgacagaattcatcaacactggtttgaagaatttcatgccgtcttatatt
gatctaatgaacatgtacttcaacttaggcttacatgacaaactggaatcagccttctcc
cagtgccttgagagatgccgacccagccgtactatttgttctatatacttggattctttg
gtgaaagttggtaatcttgctaaagctgaggagatctttggcctaatgcagagtgatgcg
gcaatcggtgttaacgctcggtcctgcaacaccatattaagtggatacctgtcatctgga
gattatgtcaaggcagaaaacatatttgacctgatgtgccagaagaagtatgacgttgaa
ccaccattgatggaaaagattgattatatcttgagcttgagcagaaaggtagtcaagaaa
cctgtaagcctgaagctgagcaaagaacaacgagagattctagtaggtcttttgttgggt
ggtttgcagatcgaatccgatgaagactggaaaaatcacatgatccggttcgagttcagt
gagagttctagcacacattctttgttaaagaggcatatatttgatcaataccatgagtgg
ctacatccttcttgcaagtccagtgagagtacggaggacataccatataagttctcaacc
atctcacattcgtattttgctttctatgcggagcagttttggccgaaaggccgaagaatg
ataccaaagctaatccatcgatggttgtcaccatgtgcgcttgcatactggtacatgtac
gggggccacagtacttcatcaggagacatattgttgaagataaagggtagtgaagagggt
gttgagaagattgtcaaatccttaagggcaaagtcccttgattgcaaggtgaagaggaaa
gggagagtgttttggataggttttctgggaagtagttctacctggttctggaaattagta
gaaccttatattctagatgacttgaagtatgctctaaaaggtggccaaatctcagataac
agcatggttgaaaccgaaaacgtcaactttggtagtgggtctgatactaatgaaaatgct
tctgattacagtgataatgataataatttgtag
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