Malus domestica (apple): 139189935
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Entry
139189935 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
139189935
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
139189935
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
139189935
NCBI-ProteinID:
XP_070665314
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Position
12:complement(31201273..31203312)
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AA seq
679 aa
AA seq
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MEKVRQWRRWGILSSVALLGLLFFFPTNNGASKTTTISGRRAQSSVISNELNFNKMLIHQ
TQNTVELNNGIVRVKFSNPGGDIIGIQYKGIDNVLETKNHPSNRGYWDLVWENGLDRLQG
TTFKIVTSTADQIEISFNKTYDVSLGDRPLPLNVDKRYIMQRGRAGFYAYAIYERLQGWP
ALRIDQTRLALKLRQDKFQFMAVSDDRQRFMPTTEDRSGDHAQTLAYREAVLLTNPSNPE
FKEEVDDKYQYSSDVKDIKVHGWISTDDAIGLWMITPGTEFRSAGPFKQELTSHVGPTAL
TVFLSGHYVGKDVGLTFADGEAWKKVFGPVFVYLNSDVPSSNAASSLWENAKEEMYEEVK
SWPYNFTQSEDYPSSGERGSVAGLLLIRDSYINESLVSASYAYVGLAASGDAGSWQTECK
GYQFWTQADNQGYFYMKDVRPGNYSLYATVPGFIGDYKYEYDITIEPASEIKLTNLTFEP
PRNGPTLWEIGIPDRSAVEFNIPDPYPSLVNRLFTNNSANKFRQYGLWERYEDYYPDHDL
IYTIGTNNYSDDWFYAHVTRNINGTYEATTWQIVFQLENVWSTGNYTLQLALASATYAEL
QVRFNNQNDTPHFSTGLIGRDNAIARHGIHGLYWLFSVDVPSYRLQEGYNTIYLTQSRTW
GPFAGLMYDYIRLEGPPPK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtgaggcaatggaggagatgggggatcctatcatcggtcgcactacttggt
ttgctcttcttcttccctactaataatggtgcttccaagactacgacgatttctggaagg
cgagcacagagcagcgttattagtaatgagctcaacttcaacaagatgttaatccatcaa
acccagaacacggtggagctgaacaatggcattgtccgagtcaaattttcaaatcccgga
ggagacatcattggaattcaatacaagggaattgacaacgtgctcgaaaccaaaaaccac
ccaagcaatagaggttactgggatcttgtatgggaaaatggcttggacagactacaagga
acaacatttaagattgttacatcgacggcagaccaaatagagatttcttttaacaaaact
tatgatgtttccctcggtgatcgtcccctacccttaaatgttgacaaaaggtacataatg
cagcgtggtcgcgctgggttctacgcgtatgccatatacgagcgtctacaagggtggccg
gcattgcgcatagatcaaacaagacttgctttgaaacttcgacaagataaatttcagttc
atggctgtatcagacgacagacagagattcatgccaacaaccgaagatcgcagcggagac
cacgctcagacccttgcctatcgtgaagctgttcttttaactaatccaagcaatcctgag
tttaaagaagaggtggatgacaaataccaatactccagtgacgtcaaagacattaaggtt
catggttggatcagcactgacgatgctatagggctttggatgatcacaccaggtaccgag
tttcgttcagcggggccgttcaagcaggaacttacctctcatgtcggcccaactgccctc
actgtgtttcttagtggtcactacgtcgggaaagatgttgggttgacctttgcagatggc
gaggcatggaagaaggtttttgggcccgtctttgtgtatcttaactcagacgttccaagc
tccaatgcggcctcctctctctgggaaaatgcaaaagaagagatgtatgaagaagtaaag
agttggccatacaatttcacccagtccgaagactatcctagctccggtgaacgaggatca
gttgctggtctgttactaatacgggattcatacatcaacgagagcctagtttcagcaagt
tatgcttatgtgggattggccgcaagcggagacgcgggatcatggcaaacggaatgcaag
ggttatcagttctggactcaagctgacaatcaaggttatttctacatgaaggatgttcga
ccggggaactatagcttgtatgcaactgttcccggcttcattggggactacaagtacgag
tatgatattacaattgaaccagcaagtgaaattaagttaactaatcttacctttgaacct
ccgagaaatggtccaaccttgtgggagatcggcatcccggatcggtcagccgtagagttc
aacataccggatccatatccaagccttgtgaaccgtttgtttaccaacaattccgcaaac
aagtttaggcaatatggcttgtgggaacgatacgaagattactaccctgaccatgatctc
atctacaccatcggtaccaacaattacagtgatgattggttttatgctcatgtgacaagg
aacataaatggtacatatgaggcaacaacgtggcaaattgtatttcaacttgaaaacgtt
tggagcaccggaaattatacgctccaattggcgctggcctcggccacctatgccgaactg
caagttcgattcaacaaccagaacgacacacctcatttttcgacagggctaatagggagg
gacaatgccatagcaaggcatggaattcatggtttgtactggctcttcagtgttgatgtg
ccgagctatcgactacaagaaggatacaacaccatctatcttacacaatcaagaacctgg
ggaccttttgcagggcttatgtacgactacatccgactagaaggacctcctccaaagtga
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