KEGG   Malus domestica (apple): 139192053
Entry
139192053         CDS       T03194                                 
Name
(RefSeq) DNA cross-link repair protein SNM1
  KO
K15340  DNA cross-link repair 1A protein
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    139192053
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    139192053
SSDB
Motif
Pfam: DRMBL SAM_1 SAM_2 Lactamase_B_2 La Lactamase_B RNF220 RMMBL
Other DBs
NCBI-GeneID: 139192053
NCBI-ProteinID: XP_070669269
LinkDB
Position
15:complement(join(3216474..3216618,3216733..3216833,3217099..3217310,3217502..3217607,3217772..3217885,3217982..3218199,3218404..3218467,3218631..3219029,3219134..3219277,3219360..3220025))
AA seq 722 aa
MSSKSQPFSSTRFNSMIAAAAADDDDFQIPLTQTATAPKPSKKLKRSKPVYRGKENIPPN
CLGSKDSTLEQTQGFKSSVFEDCSLDSIPASFDCGTLDGGGLASSSACVDEEKGLKSKGG
YLCNSIESRLIKPRPDWDFGSGDGESQDFEELDVLLKLCDRAEGGESVGVNGMEEGFGIV
EDENAGLVLCPLCGADISDLSDEERQVHSNECLDKEEVQTQDAPRPDEEREHQNSGQVLE
WLGSLGLEKYKDVFVREEIDWDTLQWLTEEDLFSIGITALGPQKKIVHALAQLREGATTT
TTSSTEAQPRKKRANGVDMPNDASEAPVNDVSKTAANKLITDYFPGFGTARKQVCTTSRE
QQRVEKRVSGSGQKRGVANNNATNRKLRDIPSWCCIPGTPFRVDAFKYLRRDCSHWFLTH
FHMDHYQGLTKSFCHGKIYCSSITAKLVNMKIGIPWDSIQVVPVNQKMNIAGINVTCLDA
NHCPGSIIILFEPPDSKAVLHTGDFRYSDSAASMSFLQACSIHTLILDTTYCNPQYDFPK
QEAVIQFVIDAIQAETFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAGKLHTLKCL
DFPEEDMQWFTLNEQESHIHVVPMWTLASFKRLKHISNQYSGRFSLIVAFSPTGWTFGKG
KKSPGRRSQQGTVIRYEVPYSEHSSFTELKEFVKLVSPVEIIPSVNNHGPDSAKAMVSLL
SS
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgtcctcaaagtcgcagcctttctcttccaccaggttcaactccatgatcgccgccgcc
gccgctgacgacgacgactttcagatcccactcacccaaacagccacagctcccaagcct
tccaaaaagctgaagcgctccaaacccgtctatcgcggcaaggagaatattccccccaat
tgtttaggcagcaaagactcgactttggagcagacccagggtttcaaatcctcggttttc
gaggactgcagcttggattcgatacccgcaagcttcgattgcgggacgctcgacggtggc
ggtctcgcttcttcttctgcgtgcgttgacgaggaaaaggggttgaaatccaaaggggga
tatctgtgcaattcaatcgaatctaggttaatcaagcctcgacccgattgggatttcggt
tcgggtgatggcgaaagccaggattttgaggagctcgatgtgctgctgaagctgtgcgat
cgagcagaaggaggagagagtgttggcgtcaatggaatggaggaagggtttggaattgtg
gaggacgaaaatgcgggtttggtgctgtgtcctctgtgtggggctgacatttcggatttg
agcgacgaagagaggcaggtccatagcaatgagtgtcttgacaaagaggaagttcaaacg
caagatgctccgcgtcccgatgaggaaagggagcatcaaaattccgggcaagttcttgag
tggctgggcagcctgggattagagaagtacaaggatgtttttgttcgagaagagattgat
tgggacactctacaatggctcacagaagaggatttgtttagcataggcattactgcactt
ggtccgcagaagaagattgtgcatgcccttgctcaacttagagaaggtgccactactact
actactagttcaacagaagcacaaccaagaaaaaagagagccaatggagtcgatatgccc
aatgacgcttcagaagcaccagttaatgatgttagtaaaacagctgcaaacaaattgatc
acagattacttcccgggatttggaactgctaggaagcaagtttgcaccacctctagagaa
cagcaaagggtagaaaaacgggtgtcaggttctggtcagaaacgtggtgtggcgaacaat
aatgccacaaatcggaaactcagggatattccctcatggtgttgcataccaggaacacca
tttcgagtggacgctttcaaatatcttagacgggattgttcgcattggtttctaactcac
tttcatatggatcattatcaaggtctaacgaagtccttctgtcacggaaagatttattgc
tcctccatcacagctaagcttgtaaatatgaagattggcattccatgggacagcatacag
gttgtacccgtcaaccaaaagatgaatattgctggtattaatgtgacctgcttggatgca
aaccactgtcctggttcgataattatacttttcgaaccacccgacagtaaggctgttctg
catacaggggactttcgctatagcgacagcgcagcaagcatgtcttttttgcaagcatgt
tctatccatactctcatccttgataccacttattgtaatccacagtatgattttccaaag
caggaggctgtaatacagttcgtcattgatgccattcaagctgaaactttcaaccctaaa
actctatttctgatcggcagctacactattggaaaggaacgactttttttggaggttgct
cgtgtgctccggaaaaagatttatgttaatgcaggaaagctgcatacattaaaatgcttg
gattttcctgaagaagatatgcagtggtttacattaaacgaacaggaaagccatatccat
gtggtccctatgtggacacttgcaagcttcaagcgactgaagcatatttccaatcaatat
tcgggtcgattcagccttatcgttgctttctctccaactggttggacttttggtaaggga
aagaagtccccaggaagaagatcacagcagggtaccgttataaggtatgaggtgccatac
agcgagcattccagctttacagaactcaaagagtttgtgaagcttgtttctccagtggaa
ataatacctagtgtgaataatcacggaccagattctgccaaggccatggtttccctgttg
tcatcttaa

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