Malus domestica (apple): 139193976
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Entry
139193976 CDS
T03194
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
139193976
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
139193976
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
139193976
NCBI-ProteinID:
XP_070674035
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All DBs
Position
02:complement(join(36562743..36562961,36563270..36563386,36563749..36563857,36563951..36564032,36564381..36564588,36564746..36564766,36565156..36565320,36566430..36566561,36566700..36566945))
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AA seq
432 aa
AA seq
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MQLCLHPKVKVKMFSQSHFLCVLLIILVSFSFSFSSDPENPLVVHDLHRHHRTRRLQSPS
AMDVTVNVDSFGAKGDGSDDSQAFTEAWKKACSSKSDVELVVPRNRVYQLKPMDFSGPCK
SQVTLKIYGTIEASAKQSDYKDSRHWILFSNLTNFRVEGGGTIDGNGRKWWQSSCKVDDS
HTCTTAPNAVTFLGCNTLEVDNLKFRDAQKMHLSFESCVNVKASNLIVTAPGDSPNTDGI
HVSGTQNIGINNCLIRTGDDCISIVSGSKTVRAEDITCGPGHGISIGSLGAGNSQAEVSD
VMVSRANLMDTTNGLRIKTWQGGSGYATNIRFKNVVMANVSNPIIIDQHYCDQDKPCLEQ
DSAVEISNVLYENVKGTSASKVAVKFDCSKDFRCQEILLKDVNLKPLADETAQASCENVS
LNRIGTVSPTCS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtgtctgcacccaaaagtgaaagttaaaatgttttcacaaagccattttctc
tgtgtacttctcataatattagtctccttttccttctcttttagtagtgaccccgagaac
ccactagttgtacatgatcttcatcgtcaccatcgaacacgccggcttcaatcaccttca
gcaatggatgttactgtaaatgtggatagctttggagcaaaaggagatggatcggatgat
tcccaggcatttacggaagcttggaagaaggcttgttcttctaaaagtgatgttgagctc
gtggtccctaggaatagggtctatcaactgaagccaatggatttctctggcccttgcaaa
tctcaagtcacgctcaagatatatggaaccatcgaagcctctgccaaacaatcagattat
aaggacagccggcattggattctgttttcaaatttgactaactttagagttgaaggtggt
ggcaccatcgatggcaatggaaggaaatggtggcaaagctcatgcaaagttgacgattcg
catacttgcacgaccgcaccaaatgccgtgactttcttggggtgcaacactttggaagta
gataatttgaagttccgagatgcccaaaaaatgcatctatcttttgagtcgtgtgtgaat
gtaaaagcttcgaatctcatagtgaccgcaccaggggatagccctaacacagatggaatc
catgtttcaggaacacaaaatattgggattaacaactgtctcattaggacaggtgatgac
tgtatttcgatagtaagtgggtcaaaaactgttcgagctgaggatataacatgtggacca
ggtcatggaatcagcattggaagcctaggagctggaaattcacaagcagaggtttcagat
gtgatggtttctagagccaaccttatggacaccactaatggattgcgaattaagacttgg
cagggcgggtctggatatgcaacaaacatcagattcaaaaatgtggtgatggccaacgtg
agcaatccaattatcatagaccaacattactgcgatcaggataaaccgtgcctagaacag
gattcggcggtggaaataagcaatgtgttatatgagaatgtaaaaggcacgagcgcttca
aaagtggcagtgaaatttgactgcagcaaggacttcagatgtcaagaaattttgttgaaa
gacgtaaacctaaaacctctagccgatgaaactgcccaagcttcgtgtgagaatgtcagt
ttaaaccgtatcggaactgtttctccaacatgctcttaa
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