Malus domestica (apple): 139196404
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Entry
139196404 CDS
T03194
Name
(RefSeq) upstream activation factor subunit spp27-like isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
139196404
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
139196404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Motif
Other DBs
NCBI-GeneID:
139196404
NCBI-ProteinID:
XP_070678393
LinkDB
All DBs
Position
05:join(15732884..15733209,15734661..15734763,15734864..15735038,15735854..15735995,15736530..15736650,15736783..15736954,15737532..15737588,15739169..15739179)
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AA seq
368 aa
AA seq
DB search
MVSDSELLTRLREILRSSDLDTATAGSVRRKLEADFGVDLSDRKKFIRDQIDIYLETQTK
PQGEEAEEEDEVGETSENAEQNDDVKEEDEEEEEEEEEEKESKSKRRKTVDKVVVKRGGF
NKICSLSPQLQEFVGVPEMARTEVVKRIWAYIREKDLQDPKNRRNIRCDESLHSLFRVNS
INMFQMNKVLSKHIWPLSREDEPVKQKKKVEESDHSISEGDVSNVAEQEEEEEVEVKKVG
RRKENKKRRSTKVDKEVKKRGGGGGFTKLCSLSPELQKFTGMSALARTEVVKKLWIYIRE
NNLQDPKNKRDIICDESLRGLFDVDCINMFQMNKALSKHILPLSEEAAPDNASQKEKQSE
EEEEEGSD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggactcggaactcctgacccggctcagagaaatcctccgcagttcggaccta
gacacggccaccgccggcagcgtccgccggaaactcgaggccgatttcggagttgatctt
tcggaccggaaaaagtttatccgggaccaaatcgacatctacctcgagacccagaccaaa
ccccaaggcgaagaagcagaggaggaggatgaggttggtgaaacctcggagaatgcagaa
cagaacgacgacgttaaggaagaagacgaagaagaagaggaggaagaagaggaagagaag
gaaagcaaaagtaaaaggagaaaaacggtggataaagttgttgtcaaaagaggtggcttc
aataaaatatgtagcttgtctccacaacttcaagaatttgttggggtgcctgaaatggca
agaacagaggtggtcaagagaatttgggcctatatccgggaaaaggatttgcaggaccca
aaaaatagaagaaacattagatgtgatgaatcactacattccctgttccgtgttaattct
attaatatgtttcaaatgaataaagtcctctccaagcatatatggccacttagcagggaa
gatgaacctgtaaagcaaaagaagaaagtggaagaaagtgatcattctatctctgaagga
gatgtaagtaatgtagcagaacaggaggaagaagaggaggtggaggtaaaaaaagttggt
agacgaaaagaaaacaagaaacgaaggtctactaaagtggataaagaagtcaagaaaagg
ggaggtggaggtggctttaccaaattatgcagcctttctccagaacttcaaaagttcact
ggaatgtcagcattggccagaacagaggtggtgaagaaactttggatttatatccgggag
aacaatttgcaagatccaaagaacaaacgagatataatatgtgatgagtcattgcgtggc
ctttttgacgttgattgtatcaatatgtttcaaatgaataaagctctgtccaagcacata
ttacccttaagtgaagaagcagctccagacaacgcttcacaaaaggaaaagcagtctgaa
gaggaggaagaagaaggatccgactga
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