Monodelphis domestica (gray short-tailed opossum): 100011748
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Entry
100011748 CDS
T01031
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04360
Axon guidance
mdo04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100011748
09158 Development and regeneration
04360 Axon guidance
100011748
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdo01009
]
100011748
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100011748
Protein phosphatases and associated proteins [BR:
mdo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100011748
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100011748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_4
Ank_5
YVC1_C
PKD_channel
Rod_CreS
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
100011748
NCBI-ProteinID:
XP_016282267
Ensembl:
ENSMODG00000005054
LinkDB
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Position
X:complement(69089491..69130777)
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AA seq
567 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSAEEKAFLTAVEKGDYASVKQVLHEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDHTEDLDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRRHWGVKMLTCITIGLLFPMLSIAYLVAPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFNEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRASDEPDNCKGIRCEKQNNAFST
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctttactacaagaaggtgaattactcaccctaccgggaccgcatcccgctg
cagattgtgcgggcagaggccgagctctccgcagaggaaaaagccttcctcactgccgtg
gaaaagggtgactatgccagtgtgaagcaggtgctgcacgaggcggaaatctactacaat
gtcaacatcaattgcatggaccccctgggccggagcgccctgctcatcgccatcgaaaat
gagaatctcgagatcatggagctgctactgaaccacagcgtctatgtgggcgatgcctta
ctctatgccatccggaaggaggtggtcggggcagtggagctgctgcttagctacaggaag
cccagcggtgagaaacaggtccccactctgatgatggacacccagttctcggagttcacg
ccagacatcacacccatcatgctggctgcccacaccaacaactacgagatcatcaaattg
cttgtccagcgccgggtcaccatccccaggccccaccagatccgctgcaattgtgtggaa
tgtgtgtccagctcggaggtggacagcctgcgccactcccgctcccgcctcaacatctac
aaggccctggccagcccctctctcattgccctgtccagtgaggaccccatcctgactgcg
tttcgcctcggatgggaactcaaggagctcagcaaagtggagaacgagttcaaggctgag
tatgaggagctctcccagcagtgcaaacgcttcgccaaagaccttctggaccaggctcga
agctcccgggagctggagatcatcctgaaccaccgggatgatcacactgaggaccttgac
ccccagaagtgccatgacctggccaagctgaaagtcgcaatcaagtaccaccagaaagag
tttgttgctcagccaaactgccagcagctgctggccacactgtggtatgatggctttcca
ggctggcggcggagacattggggagtcaaaatgttgacctgcatcaccattggcctcctg
ttccccatgctgtctatagcctacttggttgcccccaggagcaacctggggctcttcatc
aagaaacccttcatcaagtttatctgccacacggcctcctacctgacgttcctcttcatg
cttctcctggcatcccagcacatagtcaggacagacctgcacgtgcaggggccaccgccc
actgtggtagagtggatgatactgccttgggttctaggtttcatttggggagaaattaag
gagatgtgggacggcggcttcaacgagtacatccacgactggtggaacctgatggatttt
gccatgaactcgctctatctggcgacaatctcactgaaaatcgttgcctatgtcaagtac
aatggttctcgtcccagggaagaatgggaaatgtggcacccgaccctgattgcggaagct
ctctttgcaatctccaacattttaagttccttgcggctcatatccctgttcacagccaac
tcccacctgggacctttgcagatctccttggggcgcatgttgcttgacatcctcaaattc
ctctttatctattgcctggtcctactggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcctccgacgaacccgacaactgcaaggggatccgctgtgagaag
caaaacaacgccttctccacgtaa
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