Monodelphis domestica (gray short-tailed opossum): 100012553
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Entry
100012553 CDS
T01031
Symbol
MMP13
Name
(RefSeq) matrix metallopeptidase 13
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04657
IL-17 signaling pathway
mdo04926
Relaxin signaling pathway
mdo04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
100012553 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
100012553 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
100012553 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdo01002
]
100012553 (MMP13)
Peptidases and inhibitors [BR:
mdo01002
]
Metallo peptidases
Family M10
100012553 (MMP13)
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Ortholog
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
100012553
NCBI-ProteinID:
XP_001366886
Ensembl:
ENSMODG00000000794
UniProt:
F6SS23
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All DBs
Position
4:complement(259550603..259562421)
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AA seq
475 aa
AA seq
DB search
MQPTFIVALFLLSWTYCSAFPLPYDDDDDDDDDLSEENLQFAENYLKTYYNLYSNPAGIL
MKKASGTIAEQLREMQSFFGLKVTGKLDDDTLDVMKKPRCGVPDVGEYNFFPRTLKWPRF
NLTYRILNYTPDMTQAEVDKAIRKALKVWSDVTPLNFTRLHNGTADIMISFGIKEHGDFY
PFDGPSGLLAHAFPPGPNYGGDAHFDDDEIWTNSAKGYNLFLVAAHEFGHSLGLDHSKDP
GALMFPIYTYTGKSGFMLPDDDVQGIQALYGPGDKDPDPKHPKTPDKCDPALSLDAVTSL
RGETIIFKDRFFWRLHPQMVEPELFLTKSFWPELPNSVDAAYENPAHDLIFIFRGRKVWA
LNGYEILKDYPKKISELGFPKEVKRIDAAVHIEATQRTLFFTGDQFWSYDETNHTMNKGY
PRLLEEEFPGIGNRIDAVYEKNGYIYFFSGVLQFEYSIWSQRIVRVMPTNSLLWC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaactttcatagttgccttatttttattgagctggacatattgttcagctttc
cccctaccttatgatgatgatgatgatgatgatgatgatctgtcagaagagaaccttcag
tttgcagagaattatttgaagacatactacaacctttattctaaccctgctggcatactt
atgaaaaaggcatctggcactatagcagaacaactaagagaaatgcagtcattctttggc
ttgaaagtgactggcaaactggatgatgacactttagatgtgatgaaaaagcctagatgt
ggggtccctgatgtgggagaatataacttttttcctcgaactctcaagtggcccaggttt
aatttaacctacaggatcctgaattacaccccagacatgacccaagcagaagtagacaag
gcaataaggaaagcactgaaggtctggtctgatgtgacacctctcaactttaccaggctt
cacaatggcactgctgatatcatgatctcctttggaataaaagaacatggagacttctac
ccctttgatggaccttctggacttctggctcatgcatttcctcctggacccaactatgga
ggggatgctcattttgatgatgatgagatttggacaaatagtgccaaaggatataacttg
tttcttgttgctgcccatgaatttggccactccttaggcttggaccactccaaggatccc
ggagcacttatgtttcctatctacacctatactggtaaaagtggcttcatgcttcctgat
gatgatgtccaagggatccaagctctttatggtcctggagataaagatcctgaccctaaa
catcccaaaaccccagataaatgtgatcctgccttgtccctggatgctgtcactagcctt
cgaggagaaacaataatctttaaagacaggttcttctggcgtctgcatccacagatggtt
gaaccagagctctttttaactaaatcattttggcctgaacttccaaatagtgttgatgct
gcatatgagaaccctgctcatgacttaatattcatctttagaggcagaaaagtttgggcc
ctgaatggctatgagatactgaaggattacccaaagaaaatctctgaactagggttccca
aaagaggtaaagaggatagatgctgcagttcacattgaagctacacaaaggaccctcttc
ttcactggagatcaattctggagttatgatgaaactaaccatacaatgaacaaaggctat
cccagattactcgaggaagaattcccaggaattggaaatagaatagatgctgtatatgaa
aaaaatggttatatatacttctttagtggcgtcttgcaatttgagtacagcatctggagt
caacgcattgttcgagttatgccaaccaattccctcttgtggtgttga
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