Monodelphis domestica (gray short-tailed opossum): 100013051
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Entry
100013051 CDS
T01031
Symbol
APAF1
Name
(RefSeq) apoptotic peptidase activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo01524
Platinum drug resistance
mdo04115
p53 signaling pathway
mdo04210
Apoptosis
mdo04215
Apoptosis - multiple species
mdo05010
Alzheimer disease
mdo05012
Parkinson disease
mdo05014
Amyotrophic lateral sclerosis
mdo05016
Huntington disease
mdo05020
Prion disease
mdo05022
Pathways of neurodegeneration - multiple diseases
mdo05134
Legionellosis
mdo05152
Tuberculosis
mdo05160
Hepatitis C
mdo05161
Hepatitis B
mdo05162
Measles
mdo05164
Influenza A
mdo05168
Herpes simplex virus 1 infection
mdo05169
Epstein-Barr virus infection
mdo05200
Pathways in cancer
mdo05222
Small cell lung cancer
mdo05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100013051 (APAF1)
04215 Apoptosis - multiple species
100013051 (APAF1)
04115 p53 signaling pathway
100013051 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100013051 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
100013051 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
100013051 (APAF1)
05160 Hepatitis C
100013051 (APAF1)
05164 Influenza A
100013051 (APAF1)
05162 Measles
100013051 (APAF1)
05168 Herpes simplex virus 1 infection
100013051 (APAF1)
05169 Epstein-Barr virus infection
100013051 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
100013051 (APAF1)
05152 Tuberculosis
100013051 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
100013051 (APAF1)
05012 Parkinson disease
100013051 (APAF1)
05014 Amyotrophic lateral sclerosis
100013051 (APAF1)
05016 Huntington disease
100013051 (APAF1)
05020 Prion disease
100013051 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
100013051 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100013051 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100013051 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
NB-ARC
WD40_CDC20-Fz
Beta-prop_EML_2
APAF1_C
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
CARD
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Ge1_WD40
Beta-prop_NUP159_NUP214
WD40_RFWD3
PEP5_VPS11_N
WD40_like
Beta-prop_DCAF4
Beta-prop_SPT8
RMC1_N
Beta-prop_Nup120_160
CARD_2
eIF2A
Beta-prop_WDR11_2nd
AAA_16
AAA_22
AAA_18
ATPase_2
NPHP3_N
nSTAND1
Motif
Other DBs
NCBI-GeneID:
100013051
NCBI-ProteinID:
XP_001364873
Ensembl:
ENSMODG00000007679
UniProt:
F7FNF3
LinkDB
All DBs
Position
8:76134922..76220675
Genome browser
AA seq
1251 aa
AA seq
DB search
MDAKARNCLLQHKEALERDIKTSYLMDHMISDQVLSLSEEEKIRNEPTQKKRAALLITVL
LGKDNNSYISFYNALLHEGYKDLAFLLQKGLPLSSYNGKDPVDGVTSYVKTVLCEGGVPQ
RPVVFVTRKKLVKSIQEKLYKLNDEPGWVTVYGMAGCGKSVLAAEAVRDHNLLKTCFPEG
VHWVSVGQQDKSGLLMKLQNLCTRLDQDGAFSQRLPLNLEEAKDRLRFLMLRKYPRSLLI
LDDIWDSWVLKAFDSHHQILLTSRDKSVTDAMMGPKYAVPVESGLRKEKGLEILALFVNM
KKTDLPEQAHSIVKECKGSPLVVSLIGALLHDFPNRWGYYLRQLQNKQFKRIRKSSSYDY
EALDEAMSISVERLSEDLQKYYKDLSILQKDVRVPTKVLCILWDMETEEVEDILQEFINK
SLLFYDRNGKSFRYYLHDLQVDFLMEKNRDQLKELHRKVVTQFQRYCQAHSLPSDQEDSM
YWYNFLAYHMASADMRQELCNLMFSLDWIKAKTELVGPAHLIHEFMRYRHLLDKKDCTIC
ENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYRQAKLRAKQEVDKGKLYLEWINKK
TIKKLSRLVVRPHTDAVYHACFSKDGQRIASCGADKTLQVLQAETGERLLEVEAHEDEVL
CCAFSKDGLFIATCSADRKVKIWNSRTGELVHTYDEHTEQVNCCHFTNMEHHLLLATGSS
DCFLKLWDLNKQECRNTLFGHMNSVNHCQFSPDDTHLASCSADGTLKLWDVSSANECSSI
DVKQHFLTGDGRQDDVDVVVKCCSWSNDGARLMAAAANRLLVFDVQSRNLLGEIHTSHSS
TIRFCDFFPKSHLAAVALSHYCVELWNTDTGLKVADCRGHLSWVHCVAFSPDGSSFLTSS
DDQTIRLWETRKVCKNSAIMLKQEVDVAFRDDEVMVLAIDNIRRLQLINGKTGHTDYLTE
AHKSRISCCCLSPGLRFVAFGEEDGSIKILELPNGREFRSRIGHEKAVRRVQFTPDGRTL
ISSSDDSTVQVWNWQSEEFVFLKAHQEPVKDFRLLQNSRLLTWSFDGTVKVWNILTGKVE
KDFTCHQGTVLSCDVSPNATKFSSTSADKTAKIWNFESSFPLHELRGHEGCVRCSVFSGD
NALLATGDDNGEIRIWSVSSGGLLHSCLPLTVEEGEATYGGWVTDLHFSPDGRMLVSAGG
YLKWWDVDTGESLQTFYTNGTNLKTIHVSPSFRAYVTVDNLGILYILQALE
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaagctcggaactgtttgcttcagcacaaggaagccctggaaagggacatc
aagacttcctacctcatggatcacatgatttctgatcaagttctcagtttgtcagaggag
gagaaaataagaaatgagcctacccagaagaagcgagcagctttgctaattacggtatta
cttggaaaagataataattcctacatatctttctacaatgctctgctacatgaagggtat
aaggatttggctttccttctccaaaaaggtcttcctctttcttcatataatggaaaggat
ccagtggatggagtgacttcatatgtgaagacagtgctgtgtgaaggtggcgtgccacag
aggcctgttgtatttgtgactaggaagaagctggtgaagtccatccaggaaaagctttat
aagctgaatgatgaaccagggtgggtcacagtttatggtatggcaggctgtgggaagtct
gtccttgccgcagaagctgtccgggaccacaacctattaaaaacatgcttcccagaaggt
gtgcattgggtctctgtgggccaacaggacaaatctggtctcctgatgaaactccagaat
ctgtgcacacggctggaccaggatggtgctttctctcagagacttccacttaaccttgag
gaagccaaagatcgtctccgtttcttgatgctgcgcaaatacccaaggtctcttttgatc
ttggatgacatttgggattcgtgggtgctaaaagcttttgacagtcaccatcagatactt
ctcacaagcagagataagagcgtgactgacgccatgatgggtcccaaatatgctgtccct
gtggagagtggcttaagaaaagaaaaaggattggaaatcttggccctctttgttaatatg
aagaaaacagacctgcccgaacaggctcatagtattgtaaaggagtgcaaaggttcccct
cttgtagtatctttaattggtgccctattacatgatttccccaatcgctggggctactac
ctcaggcagcttcagaataagcagtttaaaagaattaggaagtcttcatcttatgattat
gaagccctggatgaagccatgtccataagcgtggaaaggctgagtgaagacctccagaag
tattacaaggacctttccatcctgcagaaggatgttagagtgcctaccaaggtattatgt
attctctgggatatggagactgaagaggtcgaggacatcctacaagaatttattaacaag
tccctcctgttttatgatcgaaatggaaagtctttccgttattacttacatgatcttcaa
gtagacttcctcatggagaagaaccgtgaccaactcaaggagttgcacagaaaggtggtg
actcagttccagaggtactgccaggcgcattccctcccttccgaccaagaagactccatg
tactggtacaactttctggcataccacatggcgagtgccgacatgcgccaggaactttgc
aatctaatgttttcccttgattggattaaagcaaagactgaattagtaggacctgctcat
ctgatacatgagtttatgcgatatagacatttattggacaagaaggattgcactatctgt
gagaattttcaagagtttttgtctctcaatggacaccttcttggacgccagccatttcct
aatattgtgcaactcggtctctgtgaacctgaaacttctgaagtgtatcgacaggccaaa
ttacgggccaagcaggaggtcgataaagggaaactttacttggaatggatcaacaaaaaa
accatcaagaagctctctcggctggttgtgcgcccccacacagatgctgtctaccacgct
tgcttttcaaaagacggacagagaattgcgtcctgtggtgccgataaaaccttacaggtg
ctgcaggcagagaccggagagcggctcctggaagtggaggcccatgaggacgaggtgctt
tgctgtgccttttccaaggatggcctctttatagccacctgctcggcagacaggaaagtg
aagatttggaattcaaggactggggagctggtacacacctacgatgagcatacggaacag
gtcaactgctgtcactttactaatatggagcaccaccttctcttagccactggatccagt
gactgtttcctcaaactctgggatcttaataagcaggagtgtcggaacaccctctttggt
catatgaattcagtgaaccactgccagttctcaccggatgatacacatttggctagctgt
tcagcggatggaacactgaagctttgggatgtgagctcagccaatgagtgcagtagcatc
gatgtgaagcagcacttcctgactggagatgggcgtcaggacgatgtggacgtggtggtg
aaatgctgctcctggtccaacgatggggctcggctgatggcggctgctgcaaacaggctc
ttggtttttgacgtccagagcaggaaccttttgggggaaattcacactagccacagcagc
accattcgcttctgtgatttctttcccaagagtcacctggcagcggtggctctgtcccac
tactgtgtggagctgtggaatacggacacgggtttgaaggttgccgactgccgaggacac
ctgagttgggttcactgtgtggcattttctcctgatgggtcttcatttctgacgtcttct
gatgatcagacaatcaggctctgggagactaggaaagtatgtaagaattccgctatcatg
ttaaagcaggaagtagatgttgcgttccgggacgacgaagtgatggttcttgcaatcgac
aacataagacgtctacaactaattaatggaaaaacaggtcatactgattatctgacggaa
gcccataaatctcgaattagctgctgctgtctgagtccaggcctgcgatttgtggcattt
ggagaagaagatgggtccataaagattctagagctccccaatggaagagagtttcgatct
cgaatagggcatgagaaggctgtacgccgggtgcaattcacaccagatgggagaaccctt
atttcgagctccgatgactctacggttcaggtgtggaactggcagtcagaggaatttgtg
tttctcaaagcacaccaagagcctgtgaaggactttcggctcttgcagaattcacggctc
ctgacctggtcgtttgatggcacagtgaaggtttggaacatccttactggcaaagtagag
aaggatttcacttgccaccagggtacggttctctcctgtgatgtttctcctaatgccacc
aagttttcatctacttctgctgacaagactgcaaagatttggaattttgagagcagtttc
cctcttcatgagctgaggggtcacgagggctgtgttcgatgctctgtcttttcaggagac
aatgccctcctggcgactggagacgacaatggagaaatcaggatctggagcgtctccagc
ggcgggctgctgcattcctgcctcccgctcactgtagaggagggagaggccacctacggg
ggctgggtgacggacctgcacttctctcccgacggcaggatgctcgtgtctgcgggcggc
tatctgaagtggtgggacgtggacaccggggaatccttgcagaccttctacaccaatgga
accaacctcaagacaatccacgtgtcccctagtttcagagcatatgtgactgttgataat
ctcgggattttatatatattacaggcattagaatga
DBGET
integrated database retrieval system
