Monodelphis domestica (gray short-tailed opossum): 100015491
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Entry
100015491 CDS
T01031
Symbol
TRAF1
Name
(RefSeq) TNF receptor associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04064
NF-kappa B signaling pathway
mdo04210
Apoptosis
mdo04668
TNF signaling pathway
mdo05200
Pathways in cancer
mdo05202
Transcriptional misregulation in cancer
mdo05203
Viral carcinogenesis
mdo05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100015491 (TRAF1)
04668 TNF signaling pathway
100015491 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100015491 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100015491 (TRAF1)
05202 Transcriptional misregulation in cancer
100015491 (TRAF1)
05203 Viral carcinogenesis
100015491 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
100015491 (TRAF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
TRAF3_RING
zf-C3HC4
TRAF2_zf
zf-RING_2
DUF7221
Motif
Other DBs
NCBI-GeneID:
100015491
NCBI-ProteinID:
XP_007474622
Ensembl:
ENSMODG00000019639
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All DBs
Position
1:complement(413590927..413636505)
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AA seq
520 aa
AA seq
DB search
MSEELSPSVKSSKMAENLTDTAPVGPHLIPDENEFPFGYPASICQGTPEPKYLCCGCHNV
LKKAQQTLCGHRYCAACLSWILRISKNPICSRCQEENPQTVGDESFLSEEKAFIDAAINK
EISELSVHCVISGCGWTGLMKNFETHVCGGVSLKDHKQTMPEIGTEEKNSLVPAEDQDRC
PFADIGCSFKQGGQERVKEHEASSLSDHLRRLLELVIRTKVQAGPSRGRGASGRRQAAEP
EPKAPERNLSDLQLQGAVEVNGDLEADYFHAASSDSEEELALQRFMKEKLLSELEEKLRV
FENIVTVLNKEVEASHLAIAASVHQSGLTQDLILSLEQRVVDLQQTLTQKDLALTKLEQT
LHLLEEASYDGVYLWKITNFTRRCHESACGRTVSLFSPAFYTARYGYKLCLRIYLNGDGM
GKGTHLSLFIVVMKGKYDALLEWPFRNKVTFMLLDQNNREHVTDSFHPDLTSGSFQKPQG
ESNIASGRPMFFPLNKLQSSKHAYVKDDTLFLKCVIETNS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggaactatctccatctgtcaagagctccaagatggcagaaaaccttactgat
actgcccctgtgggaccccaccttatccctgatgaaaatgaattcccctttggataccct
gccagcatctgccagggtactccggaacccaagtatttgtgctgtggctgccacaatgtt
ctgaagaaggcccagcagaccctatgtggccaccgctactgtgctgcctgtctctcctgg
atactgaggatcagcaagaacccaatctgttcaagatgtcaggaggagaatccacagact
gtgggtgatgaaagttttttatctgaagagaaggctttcattgatgctgccattaataag
gaaatctctgagctgagtgtgcattgtgtgatttctgggtgtggctggactggcctcatg
aagaattttgagacacatgtatgtggaggagtctccttgaaggaccacaagcagaccatg
cccgagatcggcacagaagaaaagaacagtttggtgccagctgaggaccaggataggtgt
ccctttgcagacattggctgttccttcaagcagggtggccaggaaagggtgaaggagcac
gaggcttcctcgctgagcgaccacctgagacggctgctagagcttgtgatccgcacgaag
gtccaggcggggcccagcagagggcggggggcctccggccgcagacaggctgctgagcca
gagcccaaggccccggagaggaacctgtccgacctgcagctgcagggagccgtggaggtg
aacggggacttggaggcagactacttccacgccgcctcctcggactcggaggaggagctg
gccctgcagagattcatgaaagagaagctgctctccgagctggaggagaagctgcgcgtg
tttgagaatatcgtgaccgtcctgaacaaggaggtggaggcctcccacctggccatcgcc
gcctccgtgcaccagagcgggctgacccaggacctcatcctgagcttggagcagagggtc
gtggatttgcaacagaccctgacccagaaagaccttgccctgactaagttggagcagacc
ctccatcttctggaggaggcttcctatgatggcgtctacctttggaaaatcaccaacttt
accaggagatgtcatgaatctgcttgtggaaggacagtcagtctattctcaccagctttc
tacactgcccgctatggctacaaattatgccttcggatctacctgaatggagatgggatg
ggaaaagggacacacctttctctctttattgtggtcatgaaagggaaatatgatgccctc
ctggagtggcctttccggaacaaggttacatttatgttgctggaccagaacaacagagag
catgttactgattcctttcatccagacctgacctcaggctccttccagaaacctcagggg
gaaagcaatatagccagtggccgccctatgttcttcccactgaataaactacagtcctct
aaacatgcctatgtgaaagatgacacactcttcctcaagtgtgttatagaaactaactca
taa
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