Monodelphis domestica (gray short-tailed opossum): 100016045
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Entry
100016045 CDS
T01031
Symbol
CD4
Name
(RefSeq) CD4 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03250
Viral life cycle - HIV-1
mdo03260
Virion - Human immunodeficiency virus
mdo04060
Cytokine-cytokine receptor interaction
mdo04514
Cell adhesion molecule (CAM) interaction
mdo04612
Antigen processing and presentation
mdo04640
Hematopoietic cell lineage
mdo04658
Th1 and Th2 cell differentiation
mdo04659
Th17 cell differentiation
mdo04660
T cell receptor signaling pathway
mdo05135
Yersinia infection
mdo05166
Human T-cell leukemia virus 1 infection
mdo05170
Human immunodeficiency virus 1 infection
mdo05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
mdo05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100016045 (CD4)
03260 Virion - Human immunodeficiency virus
100016045 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100016045 (CD4)
04514 Cell adhesion molecule (CAM) interaction
100016045 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
100016045 (CD4)
04612 Antigen processing and presentation
100016045 (CD4)
04660 T cell receptor signaling pathway
100016045 (CD4)
04658 Th1 and Th2 cell differentiation
100016045 (CD4)
04659 Th17 cell differentiation
100016045 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100016045 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100016045 (CD4)
05170 Human immunodeficiency virus 1 infection
100016045 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
100016045 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
100016045 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mdo04090
]
100016045 (CD4)
CD molecules [BR:
mdo04090
]
Proteins
100016045 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
Tcell_CD4_C
ig
Ig_3
V-set
C2-set
I-set
Ig_2
Ig_5
Receptor_2B4
DUF2304
Motif
Other DBs
NCBI-GeneID:
100016045
NCBI-ProteinID:
NP_001092760
Ensembl:
ENSMODG00000027359
UniProt:
A6MAP0
LinkDB
All DBs
Position
8:108220454..108260998
Genome browser
AA seq
461 aa
AA seq
DB search
MSRGAALAMLLLALQLVLLPAMTRGKESVLGQVGGTVELPCKASRKERMDFAWKQQNQDL
ILKSFQKGLSRMMWGTSNILRNRADSSSNQWDMGSFPLTIQYLETSDSGMYFCEVEDKKQ
QVQLLVFKVTANPSESVLSGNNVTLTLHSPPNLPELKIEWHGPGNTSKRILSSNKKTLNL
LQVDSEEEGEWSCTVSINGKSLKLSKRVTVHGFRHPYQRYYKIAGKDAEFNFPLNLGEQD
LNRMVPNGELTWHGEGAASQRLAKFSWKDDSLTLEDKFKFKLSKGRPITLSLSPVLLHHA
GSGVFSLMLPSGTVKQKVDLVVMRAMSHDQQLYCELSGPIIPGLTLRWQLENQTKETLEV
SEKQRKLELKQPKAGMWECQLLLKDQKLLKSNSFQLAARSEWYQPQYLAIGLGTGASLLL
LFGFIMFCYARRRHRLRRAERMSQIRRLLSEKKTCQCPHRF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggggagctgctctggcaatgttgctcctggccctgcagttggttttgttgcct
gctatgactagaggaaaggagtcagtcctgggccaggttgggggtactgttgaattgcct
tgtaaagcttcaaggaaagaaagaatggactttgcctggaaacaacagaaccaagatttg
attctcaagagcttccagaaaggtttatcaagaatgatgtggggaacgtcaaacattttg
agaaatcgagcagattcctcctcgaaccaatgggatatgggcagttttcctctgaccatc
cagtacctggagacgtcagactcggggatgtacttctgtgaggtggaagacaagaagcag
caggtacaactcctggtgttcaaggtgacagccaatccaagtgagtctgtgctctctggg
aacaacgtgactttaactttgcacagccctcccaaccttcctgaactcaaaatagaatgg
catggtccaggaaatacaagtaaaaggatcctgagttcaaacaagaaaaccttgaacttg
ctccaagtggattctgaggaggagggagaatggagctgcactgtctccataaatggcaaa
agccttaaactgagcaaaagagtcacagtacatggtttcagacacccctaccagcgctac
tataagatagcaggcaaagatgccgaattcaacttccctctaaatttaggcgaacaggat
ctgaaccggatggtgccaaatggagaactgacttggcacggggaaggggctgcctctcaa
aggttggccaagttttcatggaaggatgactccttgactctcgaagacaagtttaagttt
aagctgtccaaaggcagaccaatcactttgagtctctccccagtcctgctccaccatgct
ggctcaggagtcttctcactaatgcttccttcagggactgtgaaacagaaggttgatctt
gtagtaatgagagctatgtcccatgatcagcaattatactgtgaactgtcgggccccata
atccctgggctgacactgagatggcagttagaaaaccagacaaaagaaacactggaggtc
tctgagaagcaaaggaagctggagttgaagcagccaaaggctgggatgtgggaatgccaa
ttgctactcaaggatcagaaactactgaaatcgaactccttccagctggcagcaaggtcg
gagtggtaccaacctcaatatttggccatcggtctgggtacaggagcaagcctgttgctt
ctctttgggttcattatgttctgttatgccagacggaggcacaggctgcgccgagcagag
aggatgtctcagatcaggaggctcctaagtgagaaaaagacctgccagtgtccccaccga
ttttag
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