Monodelphis domestica (gray short-tailed opossum): 100019531
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Entry
100019531 CDS
T01031
Symbol
CACNA1F
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04010
MAPK signaling pathway
mdo04020
Calcium signaling pathway
mdo04022
cGMP-PKG signaling pathway
mdo04024
cAMP signaling pathway
mdo04260
Cardiac muscle contraction
mdo04261
Adrenergic signaling in cardiomyocytes
mdo04270
Vascular smooth muscle contraction
mdo04723
Retrograde endocannabinoid signaling
mdo04725
Cholinergic synapse
mdo04726
Serotonergic synapse
mdo04727
GABAergic synapse
mdo04911
Insulin secretion
mdo04912
GnRH signaling pathway
mdo04921
Oxytocin signaling pathway
mdo04924
Renin secretion
mdo04925
Aldosterone synthesis and secretion
mdo04927
Cortisol synthesis and secretion
mdo04929
GnRH secretion
mdo04934
Cushing syndrome
mdo04935
Growth hormone synthesis, secretion and action
mdo05010
Alzheimer disease
mdo05020
Prion disease
mdo05022
Pathways of neurodegeneration - multiple diseases
mdo05207
Chemical carcinogenesis - receptor activation
mdo05410
Hypertrophic cardiomyopathy
mdo05412
Arrhythmogenic right ventricular cardiomyopathy
mdo05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100019531 (CACNA1F)
04020 Calcium signaling pathway
100019531 (CACNA1F)
04024 cAMP signaling pathway
100019531 (CACNA1F)
04022 cGMP-PKG signaling pathway
100019531 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
100019531 (CACNA1F)
04929 GnRH secretion
100019531 (CACNA1F)
04912 GnRH signaling pathway
100019531 (CACNA1F)
04921 Oxytocin signaling pathway
100019531 (CACNA1F)
04935 Growth hormone synthesis, secretion and action
100019531 (CACNA1F)
04924 Renin secretion
100019531 (CACNA1F)
04925 Aldosterone synthesis and secretion
100019531 (CACNA1F)
04927 Cortisol synthesis and secretion
100019531 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
100019531 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
100019531 (CACNA1F)
04270 Vascular smooth muscle contraction
100019531 (CACNA1F)
09156 Nervous system
04727 GABAergic synapse
100019531 (CACNA1F)
04725 Cholinergic synapse
100019531 (CACNA1F)
04726 Serotonergic synapse
100019531 (CACNA1F)
04723 Retrograde endocannabinoid signaling
100019531 (CACNA1F)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
100019531 (CACNA1F)
09164 Neurodegenerative disease
05010 Alzheimer disease
100019531 (CACNA1F)
05020 Prion disease
100019531 (CACNA1F)
05022 Pathways of neurodegeneration - multiple diseases
100019531 (CACNA1F)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100019531 (CACNA1F)
05412 Arrhythmogenic right ventricular cardiomyopathy
100019531 (CACNA1F)
05414 Dilated cardiomyopathy
100019531 (CACNA1F)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100019531 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100019531 (CACNA1F)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100019531 (CACNA1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
100019531
NCBI-ProteinID:
XP_016282061
LinkDB
All DBs
Position
X:complement(72166882..72190838)
Genome browser
AA seq
2007 aa
AA seq
DB search
MSLGRNTTLLLLPTPEPSPADGXGPGPEWGLATGPPPVVEGQASVAAGRRRVPPSKHKGP
GAGGIQRSPRALFCLSLTNPVRRFCITIVEWKPFDILILMTIFANCVALGVYVPFPEDDS
NAGNHNLEQVEYAFLVIFTVETALKIVAYGLVLHPNAYIRNGWNLLDFVIVVVGLFSVLL
EQGPPRPGDASHAAGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSAEEDPSPCALP
GSSGRQCLGNHTECRGRWAGPNGGITNFDNFFFAMLTVFQCVTMEGWTDVLYWVQDAMGY
ELPWLYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLKGYL
EWLTQAEELDFQEQEKAEAEAEAEREGMATRRPHQRMEGGGGEGFPDLALSPGASRKGEG
FCLHSLASQQLPEEELGGGHQNSGPPFHVPLPIGVTLSEMMHKNRSQLRWFRHSTSSHAS
ETGSMTVEAGAEEDEEAGNTCSRNLAKIMKARICRRLRRANRTLRARCRHAVKSVACYWL
VLLLVFLNTLTIASEHHGQPLWLTQTQESANKVLLLLFTVEMLLKLYGLGPTAYAASFFN
RFDCFVVCGGILETTLVEAGAMQSLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMK
SIASLLLLLFLFLIIFSLLGMQLFGGKFNFDQTHTKRSTFDTFPQALLTVFQILTGEDWN
VVMYDGILAYGGPFFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLAGGDASASKGPGK
EKSAEESDSPQEKGVLVPCGEAEEERGQSEGGGSGAEEEEEEEEEEEDHHDIDEEDDNDQ
EGIRLERLQEVVPKEKVVPIPEGSAFFCLSHTNLLRVHCHALIHHRIFTNLILVFIILSS
VSLAAEDPIRAHSFRNHVLGYFDYAFTSIFTIEILLKMTAFGAFLHRGSFCRNWFNLLDL
LVVSVSLISFGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNILI
VTSLLQFMFACIGVQLFKGKLYSCTDEAKHTPTECKGTFLVYPDGDVAHPVMRERVWQNS
DFNFDNVLSAMMALFTVSTFEGWPSLLYKAIDAHAEDQGPIYNYRLEISVFFIVYIIIIA
FFMMNIFVGFVIITFRAQGEQEYKNCELDKNQRQCVEYALKAQPLRRYIPRNRHQHRVWA
TVNSPAFEYLMFLLILLNTITLAMQHYEQTAPFNYTMDVLNMVFTGLFTVEMLLKVIAFK
PKHYFCDAWNTFDALIVVGSVVDIAVTEVNNGGHLGESSEDSSRISITFFRLFRVMRLXK
LLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFFIYAVIGMQMFGKVALQDGTQINRNNN
FQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDPESDFTAGEEFTCGSTFAIVYFISFF
MLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRVWSEYDPGAKGHIKHLDVVAL
LRRIQPPLGFGKLCPHRVACKRLVAMNMPLNADGTVTFNATLFALVRTSLRIKTDGNLDL
ANQELRVVIKKIWKHTKPKLLDEVIPPPEEEEVTVGKFYATFLIQDYFRKFRRRKEKGLL
GAEDLPSNSSALRAGLKSLQDLGPEIRQALTCDLEDEGGAADPREEDGAPKEADRDSLDA
LSPSCHGPTTPGTFPVVMAFSPISTDEDGQAMRRLPPGTHSPSAVPVAEELLHSGPEGLL
EQEEEEDHPPGQDRCLHRNELTGRPHHILLPPPPPPPSPPLPPGEPSGQLGRPPGPRHRH
RRRRLLPPTPAVRKPSFAIQCMQRQGSCDDFPIPGTYQRGRPSGNSQAQGSWATPPQRGH
LLYAPLLLVEEGQLQGDYTEAGSQGPLRTYARLRMPSTHIPPGPGKRGSADSLVEAVLIS
EGLGLFARDPRFVALAKQEIADACRLTLDEMDSAACDLLALGAAARPSTGPLQMGGATGS
DEDEEVFQATEVEEEELADEMACVPAP
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgggcaggaacaccaccctgctgctactgcccacccctgagccctctcctgcg
gatggataagggccaggccctgagtggggcctggctactggcccccctccagtggtagaa
ggccaggcttcggtggcagcggggcgaaggagggtccctcccagcaaacacaaaggcccg
ggagctgggggcatccagagatcccccagggctctcttctgcctgagcctcaccaacccg
gtgaggagattctgcatcaccatcgtggaatggaaacccttcgacatcctcatcctcatg
accatttttgccaactgtgtggctctcggggtctatgtccccttcccagaggatgactcc
aatgcaggcaaccacaatctggagcaagtggaatatgcattcctggttatcttcactgtg
gagacagcgctgaagatcgtggcctacggcctagtgctgcaccccaacgcctacattcgc
aatggctggaatctgctggactttgtcattgtggtcgtagggctcttcagtgtactactg
gagcaaggccctccccgcccaggggatgcctcccatgccgcagggaagcctggaggattt
gatgtaaaggccctgagggcgttcagggtcctgaggcctctccgcctggtatcaggggta
cccagtctgcacatcgtgctcaactccgctgaggaggacccctccccctgcgccctcccg
ggctcctctggtcggcagtgcctgggtaaccacactgagtgtcgaggtcgatgggcaggg
cccaacgggggtatcaccaacttcgacaacttcttctttgccatgctgactgtcttccag
tgtgtcaccatggagggttggactgatgtgctctactgggtgcaggacgccatggggtat
gagctcccctggctctactttgtcagcttggtcatctttggctccttcttcgtcctcaac
cttgtactgggcgtcttgagtggggaattctccaaggaaagagagaaggccaaggcccga
ggagacttccagaaacttcgggaaaagcagcagatggaagaagacctaaaaggctacctg
gagtggctcacccaggctgaagagctggacttccaggaacaggagaaggcagaagcggag
gccgaggctgagagagagggcatggccaccagaaggcctcaccagcgtatggagggtggg
ggtggtgagggattcccagaccttgccctgagcccaggagcaagtaggaagggagaaggc
ttctgccttcactctcttgcttctcaacagctaccagaggaagagttgggaggggggcac
cagaattcagggccccccttccacgtacctcttcctataggagtgacactgtcggagatg
atgcacaagaaccgaagtcagctgaggtggttccgtcactccactagcagccatgctagt
gaaacgggttcaatgactgtagaggctggggctgaggaagacgaagaggccgggaacacg
tgtagcaggaacctggccaagataatgaaggccaggatatgccgcaggcttcgcagagcc
aacaggaccctcagggcccgctgccgccatgcagtgaaatccgtggcttgttattggctg
gtcctgctgcttgtcttcttgaacacgctgaccatcgcttctgagcaccacgggcagcct
ctgtggctcacccagacccaagaatctgccaacaaggtcctgctgctcctattcactgtg
gagatgctgctgaagctctacggccttggcccaactgcctacgctgcctccttcttcaac
cgctttgactgctttgtggtgtgtggaggcattctggagaccaccctggtggaggctggg
gccatgcaatcactgggcatctcagtgctgcgctgcgtgcggctcctgaggatcttcaag
gtgaccaggcactgggcgtccctcagcaacctggtggcctcccttctcaactccatgaag
tccattgcctccttgctcctgctgctcttccttttcctcatcatcttctccctcctgggg
atgcagctctttggagggaagttcaactttgaccagacccacaccaagcggagcaccttt
gacacgttcccccaagccctgctcactgtctttcagatcctcaccggagaggactggaac
gtggtcatgtatgatgggatccttgcctacggggggcccttcttccctgggatgttggtc
tgcatctacttcatcatcctcttcatctgtggcaactatatcctcctcaacgtcttcctc
gccatcgccgtggacaacctggcagggggcgatgccagtgcctccaagggcccgggaaag
gagaagagtgctgaggaaagtgacagcccccaagaaaagggagtgttggtgccctgtgga
gaagctgaagaagagagagggcagagtgaaggtggaggttcaggggcagaggaggaagag
gaggaggaagaggaggaggaggaccaccacgacatcgacgaggaggacgacaatgaccaa
gaagggattaggctagaacgcctccaagaagtggtacccaaagagaaagtggtgcccatc
cctgagggcagtgccttcttctgcctcagtcacacaaacctgcttcgggttcactgccac
gctctcatccatcaccgcatcttcactaaccttatcctggtcttcatcatccttagcagt
gtctccctggctgctgaggaccccatccgggcccactccttccgcaaccacgtccttggt
tattttgattatgccttcacttccatctttactattgaaatcctgctcaagatgactgct
tttggggcctttctacaccgaggctccttttgccggaactggtttaatctactggacctg
ctggtggtcagcgtatccctcatctcctttggcatccactccagcgccatctctgtggtc
aagatcttgcgggtgctgcgagtgctccggcctctacgtgccatcaatcgagccaagggc
ctcaagcatgtggtccagtgtgtcttcgtggccatccgcaccatcggtaacatcctcatt
gtgaccagcctgctgcaatttatgtttgcctgcatcggggtccagctctttaagggcaag
ctgtacagctgcacagatgaggccaagcacacgccgacagagtgcaaaggcaccttcctt
gtgtaccctgatggagatgtggcccatcctgtcatgagggaacgtgtgtggcagaacagc
gacttcaattttgacaacgttctgtcggccatgatggcactgttcaccgtgtccaccttt
gaaggctggccttcgttgctctacaaggccatcgatgcccacgcagaggaccagggcccc
atctacaactaccggctggagatctccgtcttcttcattgtctacatcatcatcatcgcc
ttcttcatgatgaacatcttcgtgggctttgtcatcatcaccttccgagctcagggagaa
caagagtacaagaactgtgagctcgacaagaaccagcgccagtgtgtggaatatgccctg
aaggcccagcctctccgccgctacatccctaggaataggcaccaacaccgggtctgggcg
actgtgaactcgccagcttttgagtacctcatgttcctgcttatcttgctcaacaccata
accctggccatgcagcactatgaacagacggctcccttcaattacacaatggatgtcctc
aacatggtcttcacaggcctattcactgtggagatgttgctcaaggtcattgccttcaag
cccaagcattacttctgtgacgcctggaataccttcgatgccctgatcgtagtgggtagt
gtggtggacatcgcggtcaccgaggtcaataatggaggacaccttggtgagagctccgag
gacagctcccggatctccatcaccttcttccgtcttttccgtgtcatgaggcttngtaag
cttctcagtaagggagaagggatccgcacccttctgtggacctttatcaagtctttccag
gccctcccctatgtggcccttctcattgccatgatcttcttcatctatgctgtcatcggc
atgcagatgtttgggaaggtggccctccaggatggcacccagatcaaccgtaacaacaac
ttccagaccttcccccaagctgtgctcctcctgttcaggtgcgccacaggggaggcatgg
caggagatcatgctggccagcctgcctgggaaacgctgtgacccagagtcagacttcacg
gccggtgaggagttcacctgtgggagcaccttcgccattgtctatttcatcagcttcttc
atgctctgcgcattcctgatcattaatctatttgttgctgtcataatggacaactttgac
tacctgacccgggactggtccatcctgggcccccaccacctggacgagttcaagagggtc
tggtctgagtacgaccctggggccaaaggccacatcaaacatctggacgtggtggcttta
ctccgccgtatccagcctccattgggctttgggaagctctgtcctcaccgtgtagcctgc
aagcggctggtggccatgaacatgcctttgaacgctgacgggacggtgaccttcaatgcc
accctctttgccctggtgcggacatctctgaggattaagaccgatgggaacctggacttg
gctaatcaggaactacgcgttgtcatcaagaagatctggaagcacacgaaacccaaactc
ctggatgaggtcatcccccctccagaagaggaggaagtgactgttgggaagttttatgcc
acattcctgatccaggattattttcgaaagttccgacgtcggaaagagaagggtctactg
ggggctgaggacctgccaagcaactcatctgcccttcgggctgggctgaagagcctgcag
gacctgggcccagagatccgccaggcccttacatgtgacctggaagacgagggaggggcc
gccgaccccagagaggaagatggcgcccccaaggaagctgacagggacagcctggacgct
ctctcaccatcctgccatggccccactactcctgggactttccctgtggtgatggccttc
tcccctatatccactgatgaggatggccaagcgatgaggagacttccaccaggaactcat
tctcccagtgccgttcccgtggcagaagagctgttgcactctggacctgagggcctgctg
gagcaagaggaagaagaagaccaccctcctggtcaggacagatgccttcatcgaaacgag
ctcactgggagaccccaccacatcctcctcccacccccgccaccaccaccttctcctcct
cttcctcctggggaaccctctggacaactgggcaggccaccaggtccacgccaccgccac
cgccgccgtcgtctgctgcccccaacacctgctgtccgaaagccttccttcgccatccag
tgtatgcagcgccaggggagctgtgacgacttccccatccctggaacctatcagcgtggg
agaccttctggcaacagccaggctcagggttcatgggccacaccccctcagcggggccat
ctgctctatgcgcctctgctactggtggaggagggccagcttcagggagattacactgaa
gctgggtcccaaggcccactgcgcacctatgcccgcctacgcatgcccagcacccacata
ccacctggcccggggaagaggggcagtgccgacagcctggtggaagccgtgctgatctcg
gagggcctgggcctctttgcccgtgaccctcgctttgtggccctggcgaagcaggagatc
gctgatgcttgccgcctgaccctggatgagatggacagtgctgcctgtgacctgctggcc
ctgggggccgctgcaaggccttccactggcccactccagatggggggtgccacaggcagt
gatgaggatgaggaggtcttccaggccacagaggtcgaggaggaagagctagcggacgaa
atggcttgtgtcccagccccctag
DBGET
integrated database retrieval system
