Monodelphis domestica (gray short-tailed opossum): 100022289
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Entry
100022289 CDS
T01031
Symbol
SLIT1
Name
(RefSeq) slit guidance ligand 1
KO
K06838
slit 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04360
Axon guidance
mdo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100022289 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100022289 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mdo00536
]
100022289 (SLIT1)
Glycosaminoglycan binding proteins [BR:
mdo00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100022289 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRNT
LRRCT
LRR_9
LRR_14
LRR_1
EGF_TEN
EGF_DL_JAG
EGF_4
EGF_3
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
100022289
NCBI-ProteinID:
XP_016288594
Ensembl:
ENSMODG00000004492
LinkDB
All DBs
Position
1:74062293..74309516
Genome browser
AA seq
1535 aa
AA seq
DB search
MALKHRAGHSAWLRPEVWLLVWNALCQLCARGCPALCTCTGTTVDCHGMGLRAVPKNIPR
NTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMRELERLRLNRNHL
HLLPELLFQNNQALSRLDLSENSIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALR
GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPSIGLFTQ
CAGPASLRSLNVAEVQKNEFSCSGPGEATRAPVCTLSSGSCPPMCACSNGIVDCRGKGLT
AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNS
LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLA
KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIK
SKKFRCSAKEQYFLPGTEDYQLNSECNSDAICPHKCRCESIVVECSNRXLTFLPPSLPPS
TLPLRLNNNEISILEATGIFKKLPHLKKINLSNNKVAEIEDGAFEGAASVSELHLTVNQL
ESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTISPGAFDTLQ
SLSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEE
GQEEGGCLPRPQCPQECTCLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPAQLS
TFRYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHG
NDISTLREGIFTDVTSLSHLAIGANPLYCNCHLRWLSSWVKTGYKEPGIARCAGPPDMEG
KLLLTTPAKKFECQGPPSIAVQAKCNPCLSSPCQNQGSCQNDPLDSYRCACPSGYKGRDC
EMSLNSCSSGPCENGGTCHSGAGEGAGFTCSCPMGFEGPTCGVDTDDCRDHTCENGGICE
DGINNYTCVCPLQYTGRACEQLVDFCSQDLNPCQHGAKCVGTPEGPKCECAPGYIGDNCS
INYDDCTHHQCQNGARCVDEVNGYSCLCEEGYSGQLCEMASQLLKPLSPCEGAECQNGAN
CVDLGNRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVATAEDNG
ILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLS
IDGGSPMTMDNFGKHYTLNREAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINN
ELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNAAQGPICHCEPGWGGPHCDQQLGHPC
QGHKCVHGTCVPLDALSYSCQCQDGYRGALCNQPGEPLDPCENLHCLHGHCQISSEGAAR
CVCRSGFAGELCEQEASPFCQGDSVWDFHLVQSGYAICQTTRPLFWVXCRGSCLGQGCCT
GLRMKRRRFTFECSDGSSFVEDVEKTIKCGCAGCM
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaaacacagggctggccactctgcatggctccggccagaggtctggctcttg
gtgtggaatgccctgtgccagctgtgtgcccgtggttgcccagctctctgcacctgcaca
gggacgactgtggattgccatggcatggggctcagagccgttcccaaaaacatcccgcgt
aacactgagagactggaactcaacggtaacaacatcactcggatccacaagaatgacttt
gcagggctgaagcagctgcgcgtgttacaactgatggaaaatcagattggagcagtggag
cgaggagcttttgatgacatgagggagctggagagactacgactgaaccggaaccatctg
cacttgttaccagaattactgttccagaataaccaggcactctcaagactggatctgagt
gagaattccattcaggccatccccaggaaagcatttcgtggagccacggatctaaaaaac
ctacagctggataagaaccagataagctgcattgaggatggggctttccgagctctacgg
ggactagaggtgctgacactgaataacaacaacatcaccaccattcccgtctccagcttc
aaccacatgcccaagctccgcactttccgtttgcactccaaccaccttttctgtgattgc
cacctggcctggctgtctcaatggctgaggcaacgtcccagcattggactcttcacacag
tgtgcaggacctgcctcccttcgaagcctcaatgtggctgaggtccagaagaatgagttt
agctgctcaggtccaggggaggctacccgggctcctgtctgcaccttgtcctcaggctcc
tgcccacccatgtgtgcctgcagcaatgggattgtggactgccgtggcaaaggactcact
gctatcccggccaacctgcctgagaccatgacggagatccgtctggagctcaatggcatc
aaatcaatcccccccggagccttctctccctacagaaagttgaggaggatagacttgagc
aacaaccagatctccgagattgcccccgacgcattccagggtcttcgctccctgaactct
cttgttctatatggaaacaagatcacagaccttcccaggggtgtgtttggaggtctctac
acactgcagctgctccttctcaatgccaacaagatcaactgtgtccgagctgatgccttc
caagatctccaaaacctctccctgctctcactctatgacaacaagatccagagcctggcc
aaggggaccttcacctctctccgagccatccagaccctacacctggctcaaaatccattc
atctgtgactgcaacctgaagtggctggctgacttcttacgcactaaccccattgagact
agcggagcccgctgtgctagtcctcgtcgcctcgccaacaagcgcatagggcagataaaa
agcaagaaattccggtgctcagcaaaagagcaatacttccttccaggcacagaagattac
cagttgaacagtgagtgcaacagtgatgctatctgtcctcacaagtgccgttgtgagtcc
atcgtggtggagtgttccaaccggtaacttaccttccttcctccctccctccctccttct
acactccctttacggttgaacaacaatgaaatttcaatcttagaggccactgggattttt
aaaaaacttccacatctaaagaaaatcaacctcagcaataacaaggtggcagaaattgaa
gatggtgcctttgagggggcagcctcagtaagtgagttacacctgactgtcaaccagttg
gaatccatccggagtggcatgttccggggtctggatggcctgaggaccctaatgctgagg
aacaatcggatcagctgcatccacaatgacagcttcacaggccttcggaacgtccggctg
ctctcactctatgacaaccagatcagcaccatctcgcctggagcctttgacacgctccag
tccctttccactctaaatctcctggctaatccattcaactgtaactgccagctggcgtgg
ctcggggactggcttcgtaggaggaagattgtgacggggaacccccggtgccagaatccc
gacttcttacggcagatccctctgcaggacgtggccttccccgacttcaggtgtgaggaa
ggtcaggaggaaggaggctgcctgccacgaccgcagtgcccacaggaatgcacctgcctt
gacactgttgtccgctgcagcaacaagcacctacgggctctccccaagggcatccccaag
aacgtcactgaactctatctggatgggaaccagttcaccctggtccctgctcaactgtcc
accttcagatatctgcagctcgtggacttgagcaacaataaaatcagctccttgagcaat
tcgtccttcaccaacatgagccagctcaccaccctgattctcagctacaattccctccag
tgcatccctccgctggcctttgagggactccgttctctccggctcctgtctctccatggc
aacgacatctccacgctccgcgagggcatctttaccgacgtgacctccctgtctcatctg
gccattggagccaatccactctactgcaattgccaccttcgctggctctccagttgggtc
aaaacaggttacaaggaacctggcattgcccgatgtgctgggccccctgacatggaaggc
aaactgctcctcacaactcctgccaagaagttcgaatgccaaggtcctccctccattgct
gtgcaagccaagtgcaacccctgcctgtccagcccgtgtcagaaccagggcagctgccag
aatgacccgctggactcctatcggtgtgcctgtcccagcggctacaagggcagagactgt
gaaatgtcactcaacagctgctccagcggcccctgtgaaaatggcgggacctgccactcg
ggagccggagagggcgctgggttcacgtgctcctgcccaatggggttcgaggggccgacc
tgcggggtggacacagatgactgcagagaccacacctgtgagaacgggggcatttgtgag
gatggcatcaacaactacacctgcgtgtgccccctccagtacacaggaagggcctgtgag
cagctggtggacttctgttcccaggacttaaacccatgccaacatggcgccaagtgcgtg
gggacccccgaggggcccaagtgtgaatgtgccccgggttacataggcgataactgcagc
ataaactacgacgactgcacacatcatcagtgccagaatggtgcccggtgtgtagatgaa
gtgaatggttattcctgcctttgtgaagaaggatacagtgggcaactgtgtgagatggct
tcccagctcctaaaaccactgagcccctgtgagggagcggaatgccagaacggtgccaac
tgtgtggacctgggcaacaggcctgtgtgtcagtgcctgccaggctttggtggccctgag
tgcgagaagctgctaagtgtcaactttgtggacagagacacatacctacagttcactgac
ttgcagaactggccccgggccaacatcacactccaggtcgccacggcagaagacaacgga
atcctgttgtacaatggggacaatgaccacattgctgtagagctctaccaggggcacgta
cgggtcagctacgatccgggcagctaccccagctctgccatctacagcgccgagaccatc
aatgatggccagttccacacagtcgaacttgtcacctttgaccagatggtgaatctctcc
attgatggtggcagccccatgaccatggacaactttggcaagcactacaccctcaacagg
gaggccccgctctatgtgggagggatgcccgtcgacgtgaactccgccgccttccggctg
tggcagatccttaatggcaccagcttccacggctgcatccgcaacctgtacatcaacaat
gagctgcaagacttcaccaagacccagatgaaaccaggggtggtgccaggttgcgagccg
tgccgtaagctgtactgtctccatggcatctgccagcccaatgccgcccaagggcccatc
tgccactgtgagccaggctgggggggtccccactgcgaccagcaactcggccacccctgc
caggggcacaagtgtgtacatgggacctgcgtgcccctggatgctctgtcctatagttgc
cagtgccaggatgggtacagaggagctctgtgcaaccagccgggggaaccactggatccc
tgtgagaacctccactgtctgcatgggcactgccagatttccagcgagggggccgcgcgc
tgtgtgtgccgcagtggctttgctggggagctgtgtgagcaagaagccagtcctttttgc
cagggggactctgtttgggatttccatctggtccagagcggctatgccatctgccagacc
acccgcccgctgttctgggtctagtgtcgaggctcctgcctgggccagggttgctgcacg
gggctgcggatgaaacggaggagattcactttcgagtgcagcgatggttcctcatttgtg
gaggacgtggaaaagaccatcaagtgtggctgcgctggctgcatgtag
DBGET
integrated database retrieval system
