Monodelphis domestica (gray short-tailed opossum): 100029350
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Entry
100029350 CDS
T01031
Symbol
HPS6
Name
(RefSeq) HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100029350 (HPS6)
Membrane trafficking [BR:
mdo04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
100029350 (HPS6)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
100029350
NCBI-ProteinID:
XP_001379121
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Position
1:complement(110086255..110089951)
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AA seq
787 aa
AA seq
DB search
MGAMKRTSTLRLLSDLSEFSHASRLREMLAEEPLARVRASPDGRHLLLLRPSGSPVPLLL
VSRKGAGPGLGLEPPWPAGPGPLLDAFFLKCPGWAGSPRPLLALVWVSGRAEIWGTGVHP
GWQLLQQAELCVSSKARVMAAAAVGNRLVWCEERPASTETVVGSAQAAFSHCVCTRALEP
GESGAILGAPKILLHHCPHFQLLSSHTDFFLVPTATTWPSVAHILLIWYPSTGRITISVP
AHNLTQGRNLSPKGRDSWDFRALLQGVPGLLCGGEPLDIHTCVAAQGSLLVLSPKGDVSL
IRRDGGARTVGILKCGLLSQGVPVSLGVFNNTLACVLGSGLELLDMGTGRLLERKVLSTD
RVYLLELSAPGIDEEEKENKGGLRLLSASGLFSMSWEVGKEVEWPIAEDLVFEEACSYYQ
RRSLRGARLTIDELRKGSTFQAPLALAAVLQGHRLPTKLLTDLQAELRDYHGLERLKTRL
VTGEGQEEGWTELVEREVERLLRSDLMGDKLPQLNAIFSVFPAAAWGSTRRALQLQLDKA
GQLKSQAPPDLWKKVLADTGTDGALPPFELLCQCLCRLEPCWLPPFVELAQRQGGPGWGV
GAGGPGPPLYRRALTVLGNWAGAETETLELELLLGSGRPKAILQAIGQLVQARQWDRVLD
AGLALSPSSPLLQMEIFTVLLAEFAQHRQLDAHLARLRCLCPPDLTLTDLLLLLQKHLPD
EEGPPAPFPKVGGEPPLTVGLLRGLLEQDRPKEQAPNPYEDILWDSGTCPPNPSSRQYPS
QNKRSQS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggggccatgaagcggacaagcactctgcgtctgctctcggacctgagcgagttcagt
cacgcgagccggctccgtgaaatgctggcggaggagcctcttgcccgggtccgcgccagc
cccgacggccgccacctgctgctcctgcgcccatcaggctctcccgtcccactgctgctg
gtgtccaggaagggggcggggccggggttggggctggaacccccctggcccgctggccca
ggccccttgctggatgccttctttctaaagtgcccgggctgggctggtagcccacgtccc
cttcttgctttggtgtgggtgagtgggcgggctgaaatttggggcactggagtgcaccca
gggtggcagctgctgcagcaggccgaattgtgtgtgagtagcaaggccagggtgatggct
gcagcggccgtcgggaaccgactagtgtggtgtgaagagcggccagccagcactgagact
gtagtgggatcggcacaggcagccttcagtcactgtgtgtgcacccgggctctggaaccc
ggggagagcggtgccatcctgggtgctcccaagatcttgctgcaccactgccctcatttc
cagctattatcttcccatactgacttcttcctggtgcctacagctaccacctggcccagc
gtggcccacatcttgctcatctggtaccccagtacaggcagaataactatatctgtccct
gctcacaatcttactcagggcaggaatttgagccctaaaggcagagactcctgggatttc
agagccctgcttcaaggagtaccgggactgctttgtggtggggagcccctagacatccac
acctgtgtcgctgctcaggggagcctgctagtgctgagcccaaaaggggatgtgagtctc
atccggagggatggaggagctagaacggtgggtatcttgaagtgtgggctgcttagccag
ggggtccctgtatctttgggtgtcttcaacaacaccctagcctgtgtgctgggctctgga
ctcgagctgctcgacatgggcactggacggcttctagaaagaaaggtcctaagcactgac
cgagtctacctgctggagctctcagccccagggattgatgaggaagaaaaggagaataaa
ggtggcctgaggctgctctctgcaagcggcctgttctctatgtcctgggaggtggggaaa
gaggttgagtggccaatcgcagaagacttggtgttcgaagaggcctgtagctactaccag
cggaggagcttacggggagccaggctcacgattgatgaattgagaaaaggtagcactttt
caagcaccactggccctagctgctgttctccaaggtcaccgactcccaaccaagctactg
accgatttacaagctgagctaagagactaccatggcctggagcggcttaagacccgacta
gtgactggggaagggcaggaggaaggctggactgagctggttgaaagagaggtagagcgg
ctgctcaggtcagatctgatgggggacaaactgccccagctcaatgctatcttttctgtc
ttccctgctgctgcctggggttctacccgccgagccctgcagctacaactggataaagct
ggccagctgaagtcccaagcccctcctgacttgtggaagaaggttctagctgacactggg
actgatggtgcactgcctccctttgaactcctgtgccagtgcctttgtcggctagagcca
tgctggttgccaccctttgtagaactggcacaacgacagggggggccaggctggggggta
ggagctgggggcccagggccacccttataccgacgagcattgactgtgcttggcaactgg
gctggggcggaaacagaaactctagaactagagctactattgggaagtggccggcccaag
gccatactccaggccattgggcagctagttcaggccagacaatgggaccgggtgctggat
gcagggctggcactgagcccatccagccctctgctgcagatggagatcttcaccgtctta
ctagctgaatttgctcagcatcgccagttggatgcccacctggctcgcctgcgctgcctg
tgcccaccagacttgacactcactgacctcctgctcctgctacagaagcacctgccggat
gaagaagggcctccagccccattccctaaggtgggaggcgagcccccactcacagtgggg
ctcctgagaggcctgctggaacaggacaggcccaaagaacaggccccaaacccttatgag
gatatcctgtgggactctggcacctgtcctcccaaccccagcagcaggcaatacccctca
cagaacaagagaagtcagagctag
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