Monodelphis domestica (gray short-tailed opossum): 100618692
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Entry
100618692 CDS
T01031
Symbol
C3H5orf42
Name
(RefSeq) chromosome 3 open reading frame, human C5orf42
KO
K22859
protein JBTS17
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
100618692 (C3H5orf42)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
100618692 (C3H5orf42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Joubert
TPR_11
TPR_12
TPR_1
Motif
Other DBs
NCBI-GeneID:
100618692
NCBI-ProteinID:
XP_016288100
LinkDB
All DBs
Position
3:238747493..238899480
Genome browser
AA seq
3263 aa
AA seq
DB search
MEVKLEVLLSTSIRQKKPWPRISWLGQEKEAIFLLDDRHVNEINLPSGKTKKKIPRLQLL
LKNVVILTTSSNDAWLAGILNTGEIFLWNKDHDCLKTVSATEESKTLITAALESSLRLYI
YISGDGKRILLAIPSGFILLWECLESKNILYSKNSSLLGQWSQIKPEESVILPSSEDKEA
VVDAIFIRNELLGDCCLCSFTFYSGEYLMLTLLALQWPENISQSISLLSYQVHWAHQECF
LCTLVPKCESIKSRGALIIAFSRDGLTLAVTLNQKDPKATQILFINILNFVTLCGSLKGC
SNKNPVVPSKLIRSYWVGDISWTHDSLFLACVLKRGSLVLLTCLGELLTLVTFGCSIEFG
PAEFIPLHPLITYRPQQFVPQDSSCSLDSTASDNDLMRQRFSVKTHSRLPYLIVSDGYMV
TVLRFFDNLSPSVLMKSYLLESSQRLEKIHQGLTCQSKRKNLRLRSLESLRASLLKHQGN
QSSVASATPRFLQAEEEVGELTEKMADLQDYEVEESNNSKQFINNFLPFWSQKSDSLFNE
IEEGRLEFASMFDTIHAKDDTKENDAIITELHSIQKNLLAAWNIGISKNVENKQLMLNYI
VICITHFLYVLQFVKLPSPKQNLPLNKTLRHNLWLQCVFRLFHQCLSVQYWDLRYRQDVG
HLVKLTSQTLKLMFIQQQHDQLFSDTLLGCFNLLKMVSDSLNSIYSLQHQVISTADGNKI
VNHESLVVPIFQKFSHNCTQKSWPWNSFLKIPPPSINLVQKPSHRLSILWQLLYKQTLWY
QAHLSRMDPKDDRQLTEKIALEESIARSLLCHIQANLQTAGYCLNQALELKPVIGEEYFL
LGSYEESIQLWKKALQEIRTTGGKRTCLLQTRYYLAQLYCHLYCYNLNDAQGMCDQLVRE
ILRQSQMPIKEEEYFPESFHCAFGIIGNVHPEAAVVVVKCMARFMAAYFTNQKLYVLPPH
NVDVLPPLHIESEQSVRIIPLQHSKVASVIRDQNLSYVWTVEYALELLFITGLVPEAVWL
SHRLGDWKMAVSIGLAFKLCYKSNSILSRCKKKDLILPLNMTPTRTFQEKLQYFLGQPAS
LEVAHELGPKYKQFTDPIEEEDVHLLFSSIQEVLKAAVMADADILSETFQLLIDSAKDFS
KRLWGLVPVGLYLPSPPLYCPQPAVLSEDHGDDLLLKAEKDYRQKVSGILQRILLLFRAA
CCSFPAAQWYILKLRWARKVMQKIRIKGFLPSLSPFPESLLHYCKVGMAFYQPGASQDQK
LDEVSCKTIGCFRELCALCWMLHVREKLSYSCRQYQIARENMEKKKDMELEFDSCMVEHC
LSALEWACRMLPFSRFMNIEELVQDIILSLIGELPPTRKVAEILVKAFPNSEDIRVPLRD
KYNSLQQRLRHCTVKGPQTEEMMSVIMHSIHKVRVKALKRVRRNIGPTEMNIWEPPEEET
TDKVHTYNGFSLETSLSRSTFTEGEDSVAHSESGTVDTFSKALPSEKKIKNTQHHAESTL
INTHDSKKEKINSEDYPESKGDHENLPRENPVPIVGVWEFERDDDEYIKFLDLFLSYVLE
RDLIGSNNSSIPFLSSFSAHLKEHELNSLLFDVHTTLKRRQGKPKSQNIFRAGSCYVIIP
ESCESEKSSTLNSENIRDLENQTSTPSVLVVQGPRSFIQNSSIKVIQNMEKRGLFGLKEK
SVYRTRDDNREMPTLHRLSKQVFLPQNFKTPKFAYKAVQWDDIIPHEELPLELKNKFGTI
AKLLEWMIRWSDRRLLCDSTKPEPSCQYSPVIRVRTSAAAILTSLWLLEQSYARQQTSHV
TCKVPENHYFVPSVSLPETKPNIEKESSVDTSCPASVLVLNEIQEVHNSDGPYDNILDRI
TTHSKEPEIKELIEESISVTHCTDKEFTDFDDDILEEMEAFMQEEIKAQDCRENSGESFG
SLKNTAISVSLMPLEGQVEQHSRKKVESSLKESVEELVKISLEQKGMVETVADTKLVIPQ
SFCLDSSADTPSIQVSAPNDQSSLLPTLVSDPTSVSSNTPISKRHRRHKNESREQMPNSS
EPVRQMLQDELFRLVQLQQINFLSLMQIVGSSFSSLPNIQLTQQHLEGSQISGATGGSGD
VEHSVKNLNKDLQLRSNGENSRQFEKRRPHHEGIVHSDQNKVRHIQNIPSFCAPSGHLDV
SSKNEGVIPQGLGSSTPCSPTVAASNPFHLLSTTPTVDKSPMLIPAVKTLNPANGFPLLK
IQMKPEFKPLPVHPVRTPQVPFRPPPEPKEAWGLSSSGKKYLSLAQDITSTSHLNLNQYD
VETVQKALEQKRWAEIISRETPKHLNLDQYIDQEKMTPQQDSAAKRQEKAFDVKPEPSEM
HNQDFLGVPLLHLQFNPTMFSTASRTSFATPSIPSRPKEKEKDLKEILYPSIKLLHTCLP
PEHKCQKPKFIPIENLLAFKQSQQKQSFNLFEHGKLRNIHLLKAKIEPKMDNKKRERRRA
KKELEEKSSEKQEKKCVTFQSEDSIINHNDFKVVMKQEDQQEQPIPQATDSFVIPLESLG
KDISTSAALHFMASVKKKVVENQDASTNTDPGKTLFFLFSFFFLFFFCGCLLVRASVRQN
QPVGHNYINVIDIEASDLLQELPDREETTDDIVNKKESDNLEIPSSANLHYMAASVTNAI
PPDHFLSKDLPKLQVQVQESTVKSDGVEDYLTWKQCQDFSTTPCTVPSKKGLDIEHLNSK
LLEIDEKLLVLQDIAATVEEDFSNTKLVDPPCALVETEDILELSSPPEVHKVTAFSQTCR
SPEEVYSFNHQIDEEVDEEEVEEEEEEEKEEEEEEEEKGEDAPVIEFTETKHTLWKSCSF
SSVISSFNVSSDKFTSTGADSSEDSVGSVLADLQISGLTDVADIINDLITESGISSEELG
LTEYQAKKLSRIHSTPKRKKSQRTEKEKREIRAWMKKKRKERMAEYLAQLAVKREQEHEP
FQSPRKQLCMTSKEIRMCQKMKTEKDRLQLSEHYHRRVAQAYNLMNELLVESAQTTGISP
TKPPCGPAKSFRISTRQRHLPPRGVDHNIHTSSPGRNTKVRFAPKPTYIHARSPPRQHQH
SFPRNTFVFSSFLISKNAWSCRNAVASYLEKEHWVKKEKDTKPQSSFFPLVFENGFMLYN
YVKSKTRIFLSGMATVSIKKTNQVNKRMAQNASSSSDLSREDFGYPCPRARSIKDSKTSS
TTTNTEEYGRQHSLANSWALPEEIDKILSRSPNSSLEDISPPEDEGFPISINGLDSGSES
TGSILSKIDWRAVDDMVASVENR
NT seq
9792 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaaactagaagttttattatcgacaagtatcagacagaaaaaaccttggcct
cgaatttcctggctcggacaggaaaaggaagctattttccttttggatgataggcatgta
aatgaaattaatttgccatctggaaagacaaagaagaaaattcctcgtctacagcttttg
ctgaaaaatgttgtcatcttaacaacttccagtaatgatgcttggctagctggaatactt
aacactggtgaaatttttctttggaataaagatcatgactgcttgaaaactgtatctgca
actgaagaatctaagacactgataacggcagccttagaaagttctctgagactctatatc
tatatatcaggagatgggaaaagaattctgcttgccataccttctggattcatcttacta
tgggaatgtttggagtccaagaatattttatattccaaaaattcttcacttttgggccag
tggtcacaaatcaaacctgaagaatcagttattttgccttcttctgaagataaagaagct
gtagtggatgctatttttataagaaatgagttgcttggtgattgctgcttatgttcattt
actttttattctggggaatatttgatgttaacacttttggcacttcagtggcctgaaaat
atatctcaatctattagtttgttgtcataccaagtccattgggcacatcaagaatgtttt
ctatgcactctggttcctaaatgtgaatcaataaaatcaagaggagccttgattatagca
ttttcaagggatggccttaccctggcagtaactcttaatcaaaaagatccaaaggcaaca
cagatactatttataaacatactgaattttgttactctctgtggtagtcttaaaggctgt
agtaataagaatcctgtggttccatccaaactcattagatcctactgggtgggtgatatc
agctggacccatgatagcctttttctggcctgtgtattaaaacgtggctccttggttcta
ttgacctgtttgggtgaattgctaacattggttacatttggttgctcaatagaatttgga
ccagcagaatttattcctcttcatccactaataacatatagaccacagcaatttgtacct
caagattcaagttgttcccttgattcaacagcctctgataatgatctgatgaggcagaga
ttttctgtaaaaacacactcaagattaccttacctgattgtctctgatggatatatggtt
acagtacttcgattttttgataatctatccccatcagtacttatgaaatcttatttactt
gaatcatcccaaaggcttgagaaaatacatcaaggtctgacatgtcagtctaaaagaaag
aatctgagattaagatcattggagtccctccgggctagtctgttaaagcatcagggaaac
caaagttcagttgcctctgccaccccgagattcttgcaggcagaggaagaagtaggagag
ttgaccgagaaaatggcagatttgcaggattatgaagtagaagaaagtaataatagtaaa
cagtttatcaacaattttctccccttttggagtcagaaaagtgattctttgtttaatgaa
attgaagaaggaagattggaatttgcatctatgtttgatactattcatgcaaaagatgat
actaaagaaaatgatgcgatcataacagaactacattctatccagaaaaatctccttgca
gcctggaatattggaatttcaaaaaacgtggaaaacaaacaattaatgttaaattacata
gtcatctgtattactcattttctctatgttctccagtttgtaaaattgccttctcctaaa
cagaatcttcctttaaataagactctcagacataatttgtggctgcagtgtgtctttcga
ctttttcatcagtgtttatctgttcagtattgggatctaagatacagacaggatgtggga
catttggtaaagctgacatcacaaactctgaagctgatgttcattcaacagcagcatgat
cagttattctcagatacccttttaggttgtttcaacttacttaagatggtctctgacagt
ctaaatagcatatattctctacagcatcaggtgatttcaacagctgatggaaataagata
gtaaatcatgaatcattggtggtacctatttttcaaaaattttctcacaattgtactcag
aaatcatggccatggaattcttttttaaagatacctcctccatctataaatcttgttcaa
aagccaagccacaggttatccatcctttggcagttattgtacaaacaaactttgtggtat
caagctcatctaagcaggatggaccctaaggatgatagacaattgactgaaaagatagcg
cttgaagaatctattgccagatccttgttatgccacatacaagctaatctacagacagca
ggatattgcttaaaccaagccttggagcttaaacctgtaattggtgaggaatactttctt
ttgggatcatatgaagaatctattcagctatggaagaaagcactacaagaaatcagaaca
acaggaggaaagaggacatgccttcttcagacacgctattatcttgctcaattgtattgc
catctctattgttataatttaaacgatgctcaaggaatgtgtgatcagttggtaagagaa
atactgagacagtctcagatgcctattaaagaagaggaatattttccagagagttttcat
tgtgcttttggaataattggaaatgttcatcctgaggctgcagttgtggttgttaagtgc
atggcaagattcatggctgcctatttcaccaaccagaagctttatgtgctcccacctcac
aatgtggatgttcttcctccacttcacatagaatcagaacagtctgttcgaatcattcct
ctgcaacactctaaggtggcaagtgttattagagatcaaaatctctcttatgtgtggaca
gttgaatatgctcttgaattgctatttatcactgggttggtcccagaggctgtgtggctg
tctcacagacttggtgattggaagatggcagtttcaattgggttagccttcaaattatgc
tataaaagtaacagcattttatcaaggtgtaagaaaaaggatttaattctacctttaaac
atgactccaacacgaacttttcaggaaaaactgcagtattttttaggtcagccagcatct
ttggaagtggctcacgagttgggtcctaaatataaacagtttaccgatcccattgaagaa
gaagatgtacacctactttttagttccatacaagaagtattgaaagcagcagttatggct
gatgctgatatcctctcagagacatttcagcttttgatagactcagccaaagacttcagt
aagagattatggggcctggtacctgtgggcttgtatcttccctctcctccattatattgt
cctcagccagctgttcttagtgaggaccatggtgatgatctcttgttaaaagctgagaaa
gattatcgccagaaagtgtctggcattcttcagcgaattcttctgctcttccgggcagct
tgttgttccttccctgcagctcagtggtacatcttaaaattgagatgggcaagaaaagtc
atgcaaaagattcgaattaaaggcttccttccttcattgagtccttttccagagtctttg
cttcattattgtaaagttggtatggcattctatcaacctggagcctctcaagaccaaaag
cttgatgaagtttcttgtaaaacaataggttgcttcagagaactctgtgctctgtgttgg
atgcttcatgtccgggaaaagttgtcttacagttgtagacaatatcagatagcaagagaa
aatatggaaaagaaaaaggatatggaactggaatttgattcttgtatggtagagcactgt
ctcagtgcactggaatgggcatgtagaatgttgccattctctaggtttatgaatattgaa
gaacttgtgcaggatataattttgagtcttataggagaactaccacccaccagaaaggtt
gcagaaattttggtgaaagccttccccaattctgaagatattcgagtacctttaagagat
aaatataattctctccagcagagactcagacattgtactgtgaaaggtccacaaactgaa
gaaatgatgtctgttattatgcattcaattcacaaagtaagagtgaaagctctgaaaaga
gtaaggaggaatataggccctactgaaatgaatatctgggaaccacctgaagaagagacc
acagataaggttcatacttacaatgggttttcacttgagactagtttaagcagaagtact
tttactgaaggagaagattctgtggctcatagtgaatctggaactgtggatactttctca
aaagctttgccatctgaaaaaaaaataaagaatacccagcatcatgcagaatctacattg
attaatacgcatgacagtaagaaggaaaaaataaattcagaagactatcctgaaagcaaa
ggtgatcatgaaaatttacccagagaaaatccagttcctatagtaggtgtttgggaattt
gaacgtgatgatgatgaatatattaaatttctcgatctattcttaagttatgtacttgaa
agagacttgattggttcaaataattctagtattccttttctaagtagcttttcagcccat
cttaaggaacatgaacttaattctttgctttttgatgttcacacaacattaaaacgtcgt
cagggtaaacccaaaagccagaatattttcagagctggctcctgctatgttattattcct
gagtcttgtgaatctgaaaaatcatccactttgaatagtgaaaacatcagagatttggaa
aatcaaacatctacaccttcagtattagttgttcaaggacctagatcttttatacagaat
tcttcgattaaagtaattcaaaacatggaaaagagaggcttgtttggtttaaaagaaaaa
tcagtgtacagaaccagagatgacaatagagagatgcccacactccacagattatcaaaa
caagtttttcttccacaaaactttaagactccaaaattcgcttacaaagcagttcaatgg
gatgacatcattcctcatgaagaacttcctctagaactaaagaataaatttggcactata
gcaaaattactggaatggatgataagatggtctgatagaagattgctgtgtgattccacc
aaacctgagccatcctgtcaatacagccctgtcattcgtgtgagaacttcagcagctgcc
attctcacatccctatggcttttagaacagtcatatgctagacagcaaacaagtcatgtt
acctgtaaggttccagagaatcattattttgttccttctgtgtccttgcctgaaactaaa
cccaatattgagaaagaaagcagtgtggataccagctgtccagcatcagtgcttgttcta
aatgagatccaggaagtccataatagtgatggaccttatgacaacattttggatagaata
acaactcattcaaaagagcctgaaataaaagaactcattgaagagagcatttctgttact
cattgtactgataaagaatttacagattttgatgatgatattctagaagaaatggaagca
ttcatgcaggaggaaataaaagcgcaagactgtagagagaattctggagaatcatttgga
agtttaaaaaacactgctatttccgtcagcctcatgccattagaagggcaagtagaacag
cattccagaaaaaaggttgagtcttcattgaaagaatcagtggaagaattagtgaaaata
tcacttgagcagaaaggtatggttgaaactgttgctgacactaagctcgtcattcctcaa
tcgttctgtttagattcaagtgcagatactcctagcatacaagtttctgcaccaaacgac
cagtcttccttacttccaactttggtttcggatccaaccagtgtttcctcaaatactcct
atttcaaaacgtcacaggcgtcacaaaaatgagtcccgtgagcaaatgccaaattcttca
gaacctgttagacagatgctccaagatgaattatttagactggttcagttgcagcagatc
aactttttaagtctaatgcaaatagtaggatcatcattttccagccttcccaatatccaa
ctcacacagcagcacttggagggcagccaaatttcaggtgccacaggaggcagtggtgat
gttgaacactctgttaaaaatcttaacaaagacttgcaacttagatccaatggagaaaat
tccagacaatttgaaaagagaagacctcatcatgaaggaattgtccattctgatcagaat
aaagtcagacatattcagaatattccatccttttgtgctccctcaggtcatttagatgtc
tcatctaaaaatgaaggagtaattccacaaggtctgggctcatccactccatgttctcca
actgttgctgcaagcaatccttttcatctgttgtctaccacacccactgttgataagagc
cctatgcttattccagctgtaaaaaccttaaatcctgccaatggctttcctttgctcaag
atccaaatgaagcctgaattcaagcccctccctgtccatccagtaagaaccccacaggtt
ccattcagacctcccccagagccaaaagaggcctgggggttatccagctctggaaaaaaa
tatctttcactggcccaggatatcacttcaacatcccatttgaatttgaatcagtatgat
gtggaaactgtgcagaaagcacttgaacagaagagatgggcagaaataatatccagagaa
acccctaaacatctcaacttagatcaatacattgaccaagaaaaaatgacacctcaacag
gactctgcagcaaaaagacaagaaaaagcatttgatgtgaaaccagagccttccgagatg
cataatcaggattttcttggtgtacctttgctacacctacaatttaatcctactatgttt
tcaacagcctcgagaacatcatttgctactccttcaatcccaagtagacctaaagaaaaa
gaaaaagacttaaaagaaatcttatacccaagtataaaattacttcatacttgcttaccc
ccagaacacaagtgccagaaaccaaaattcatcccaattgaaaatctccttgcatttaaa
caaagccagcagaaacaatcatttaatttatttgaacatgggaaacttagaaatatccac
cttttaaaggccaaaatagaacctaaaatggataataaaaaaagagaaagaagacgggct
aagaaagaacttgaagaaaagagttcagagaaacaagagaaaaaatgtgtgacattccaa
tcagaggattccattattaatcacaatgatttcaaagtagttatgaaacaagaggatcag
caagagcaacctattcctcaggctactgatagttttgtaattcctttggaatcactagga
aaggatatctctacttcagctgcattacattttatggcttctgtaaaaaagaaggtggtg
gaaaatcaagatgcaagtacaaacacagatccaggtaaaacacttttttttcttttttct
tttttttttctttttttcttttgtggttgtctgttagtcagagccagcgtgcgtcagaat
cagccagttggacacaattatataaatgtgatagacattgaagctagtgatctccttcag
gaattgcctgatagagaagagactacagatgatattgttaacaaaaaggaaagtgacaac
ctggaaattccatcttctgcaaatttgcactacatggcagcttctgttaccaatgcaatt
cctcctgaccattttctgagtaaagatctgcccaaattacaagttcaggtccaagaatct
actgtaaaatcagatggtgtagaagactatttaacctggaaacaatgccaggatttcagc
actacaccttgtacagtaccatcgaaaaaaggtcttgatatagagcatcttaattctaaa
ctcctggaaatagatgaaaaactacttgtcctgcaggatattgcagctactgtagaggaa
gattttagcaacactaagttggtagacccaccctgtgccctggtggagacagaagacatt
ttggaattgtcatctcctccagaagtgcataaagtgacggcattctcacaaacttgtaga
agtcctgaagaagtctattcttttaaccatcaaattgatgaagaagtagatgaagaagag
gtggaagaggaagaagaagaagaaaaagaagaagaagaagaagaagaagaaaaaggagaa
gatgctccagtaattgaatttactgaaacaaagcatactctgtggaaatcttgttccttt
tcttctgtcatttcatcttttaatgtttccagtgacaagtttacttctactggtgcagat
agtagtgaagattctgttggaagtgttttagcagatttgcagatttctggactaactgat
gttgctgacataattaacgatctgatcactgagagtggcatatctagtgaagagcttggt
ttaacagaataccaggctaagaaactctccagaatccatagcaccccaaagaggaaaaaa
tcacaaagaacagagaaggagaaaagagaaataagagcctggatgaaaaaaaagagaaag
gagagaatggctgagtatctagcacagctggctgtgaagagggagcaagaacatgaaccg
tttcagtctccaaggaagcagttgtgtatgacttcaaaggaaattaggatgtgtcagaag
atgaagactgaaaaagacagattgcagctgtctgagcactatcatcgtcgagtggcacaa
gcgtataacctaatgaatgaactgttggttgagtcagcccagacaacaggaatatctccg
acaaagccaccatgtggcccagctaagtcttttcgcatttccacgaggcagcgccatctt
cctccaagaggagtggaccataacattcatacatcatcaccaggaagaaatacaaaagtt
agatttgctcccaaacctacttatattcatgcaagaagccctcccagacaacatcaacat
tcatttccacgaaatacttttgttttctcttctttcctgatttccaaaaatgcctggtct
tgtagaaatgctgttgctagctatcttgaaaaggaacattgggttaaaaaggagaaggat
actaagcctcaaagttcctttttcccacttgtatttgagaatggtttcatgctgtacaac
tacgtcaagagcaaaacacgcattttcctttcaggaatggcgactgtttcaataaagaaa
acaaaccaagttaacaaaaggatggcacaaaatgcatcaagctcttcagacctctccaga
gaagactttggttatccatgtccaagagccagatctataaaagactctaaaactagttca
accacaactaatacagaagaatacggcaggcaacacagtctagcaaattcctgggctctg
cctgaagagatcgacaagattctcagcagaagtccaaactcctcccttgaggacatttca
ccacctgaagatgaagggtttcccataagcatcaatggcctggatagtggatctgagagc
actggcagcatccttagcaagattgactggcgtgctgtcgatgacatggtggcctctgta
gaaaacaggtga
DBGET
integrated database retrieval system
