Microchaete diplosiphon: NIES3275_04200
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Entry
NIES3275_04200 CDS
T09944
Name
(GenBank) radical SAM domain-containing protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp00790
Folate biosynthesis
mdp01100
Metabolic pathways
Module
mdp_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
NIES3275_04200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdp03016
]
NIES3275_04200
Enzymes [BR:
mdp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
NIES3275_04200
Transfer RNA biogenesis [BR:
mdp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NIES3275_04200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BAY88445
LinkDB
All DBs
Position
complement(507293..508090)
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AA seq
265 aa
AA seq
DB search
MTAKTTVKPTARLIEVFSAIQGEGLNVGTRQIFIRFALCDLRCHFCDSAHTWNAPSTCRI
ERTPGLRDFEEHSNPIPVPILLEWIERQNQPSIHDSISLTGGEPLLHAPFLELFLPQVRS
LTNLPIYLETGGHRPEQLAMILPYLDSVGMDLKLPSVSGESYWQEHGQCLKLSYDSHLNI
FVKIIISQQTDPTELERSALLVADVSPDIPVFLQPVTPLPVSEKSTAKTILAPTPDQVLQ
WQALMKQWLKHVRVVPQTHKMLNQL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaaaactacggttaaacctactgcacgcctgattgaggtcttttctgctatt
caaggggaaggactgaatgtcgggacacgtcagatttttattcgctttgctttgtgtgac
ttacgctgtcacttttgcgatagcgcccatacttggaatgcaccttctacttgtaggata
gagcgaacccctggattacgagactttgaagagcactctaaccctatcccagtgcccatt
ttattagaatggatcgaacggcaaaatcaaccgtctatacacgatagcattagcttaacg
ggtggcgaacccttgcttcatgcaccatttttagagctatttctaccgcaagtgcgatcg
cttaccaatctgcctatatatttagaaactggaggtcatcgtccagaacagttggcaatg
attttgccctacctcgactctgtaggtatggatttaaaattacctagcgtcagcggtgaa
agctattggcaagaacatgggcaatgtctgaaattatcttatgattcacatttaaacatt
tttgtcaagataattatttcccaacagacagacccaactgagttagaacgttcagctttg
ttggtagcagatgttagtcctgatatcccagtgttcttacaacctgtgacacctttgcca
gtgtccgaaaaatctacagcaaaaactatacttgcgcctactcccgaccaggttttgcag
tggcaagctttaatgaagcagtggttaaagcacgttcgtgtcgtgcctcaaacccataaa
atgttgaatcaactgtaa
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