Microchaete diplosiphon: NIES3275_37560
Help
Entry
NIES3275_37560 CDS
T09944
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
mdp
Microchaete diplosiphon
Pathway
mdp01501
beta-Lactam resistance
mdp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES3275_37560
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES3275_37560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdp03036
]
NIES3275_37560
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdp02000
]
NIES3275_37560
01504 Antimicrobial resistance genes [BR:
mdp01504
]
NIES3275_37560
Chromosome and associated proteins [BR:
mdp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES3275_37560
Transporters [BR:
mdp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES3275_37560
Antimicrobial resistance genes [BR:
mdp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES3275_37560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
HH_EMRA
Beta-barrel_YknX
RND-MFP_C
CzcB_C
YknX_C
Beta-barrel_AprE
BSH_CusB
WEMBL
LcnD_C
HH_CzcB
Beta-barrel_RND
Motif
Other DBs
NCBI-ProteinID:
BAY91731
LinkDB
All DBs
Position
4815563..4817005
Genome browser
AA seq
480 aa
AA seq
DB search
MILDGNQPHKFSTMPNTIKASQLINSQLHHTSNQEHRRKFPHFCGSQSSLLIACFLGLSL
MTVGCGSSPKESADAQSQGPSTARQGGGATPVDVAIARTENLQTAPEYTGTTTPFRTVSL
RSQVEGRLLALNLDVGDRVKQGQNIGQLDDVLLLTDLKQAEAELASLKSEVARATNQVSN
ARAEVERARLELLQAQADSQRQQQLVKQGAIAEQTAQQARTAAQTAAQALRAATEQVRTE
QQAVAAAQGRVVAQQAVVAQAKERRSYSRLTSPITGVVTEKVTEPGNLLQAGGEVLKIAD
FNQIKVVVQVSELELAQIRVGQSVQVRLDAFPNQTLTGRVTRISPTADATARLIPVEVVI
ANREGKIGSGLLARVNFATQAAQRVVVPQTAIQKQATNSASSQPKTSKQESDNQTGTLFV
VTNVEGKAQVAARSVTLGKRSDGKVEILSGLQPGDRYVVRSGKPLKDGDAVRLSIISEKS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgattttggacggaaatcaaccgcacaaattctcaacaatgccaaataccatcaaagca
tctcagttaattaactctcaattacaccacacaagtaatcaagaacataggcggaagttt
cctcatttttgtggatctcagtctagtttattgattgcttgcttcctaggcttgagcttg
atgacagtaggttgtggttcctcccctaaagaatcagccgatgcacaatctcaagggccg
agtactgcaagacaagggggaggcgcaacacccgtagatgtggcgatcgcccgcacagag
aacttgcaaacagcaccagaatatacagggactaccacacccttccgcacagtttcactg
cgatcgcaagtagaaggaaggctattagctttaaatctagatgtgggagatcgagtcaag
caagggcaaaacattggccagttagatgatgtcctcttgctcacagacttaaagcaagca
gaagcagagttagcatccctcaaatcagaagtcgcaagggcaacaaatcaggtaagtaat
gcccgtgccgaagtcgaaagggcgcgcttagaattgttgcaagcccaagccgactcacaa
cgccagcagcaattagtcaaacaaggtgcgatcgccgagcaaacagcccaacaagcccgt
acagcagctcaaacagccgcccaagcccttcgagccgctaccgagcaagtgcgtacagaa
cagcaagcagtcgccgccgcccaaggtagagttgtcgcccaacaagcagtagtcgcccaa
gccaaagaacgccgatcctacagccgtttgacatctcccattactggtgttgttaccgaa
aaggttacagaaccaggcaatttgctccaagctgggggcgaagtcttaaaaattgccgac
tttaaccaaatcaaagtcgtagtgcaagtttctgaattagaactagcacaaattcgcgtg
gggcaatctgtgcaagtccgcttagatgcctttcccaaccaaacattaaccgggagagtg
acacgcatttccccaaccgccgatgctacggctcgtttgataccagtagaggtagtaatt
gccaacagggagggcaaaattggtagtggactgctagcacgcgtcaattttgccacccaa
gccgcacagcgagtagtagtaccgcaaacagctattcagaagcaagccacaaattccgcc
tcttcccaaccaaaaaccagtaaacaagagtcagataaccaaactggaactttgtttgta
gtcaccaatgtcgaaggtaaagcccaggtagccgcccgttctgtcaccctggggaaaaga
tctgatggcaaagtcgaaattttatctgggttacaaccaggcgatcgctatgtagtgcgt
agtggtaaaccactaaaagatggagacgctgtgcgtctttcaattatttcagaaaaatct
tag
DBGET
integrated database retrieval system
