Microchaete diplosiphon: NIES3275_47900
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Entry
NIES3275_47900 CDS
T09944
Name
(GenBank) putative efflux transporter, RND family, MFP subunit protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
mdp
Microchaete diplosiphon
Pathway
mdp01501
beta-Lactam resistance
mdp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES3275_47900
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES3275_47900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdp03036
]
NIES3275_47900
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdp02000
]
NIES3275_47900
01504 Antimicrobial resistance genes [BR:
mdp01504
]
NIES3275_47900
Chromosome and associated proteins [BR:
mdp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES3275_47900
Transporters [BR:
mdp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES3275_47900
Antimicrobial resistance genes [BR:
mdp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES3275_47900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
YknX_C
HH_MFP_RND
RND-MFP_C
BSH_CusB
Biotin_lipoyl
CzcB_C
BSH_YknX
PTS_EIIA_1
AAA_13
BSH_CzcB
Beta-barrel_AprE
ATG14
CCDC93_CC
EIF3I
Rab11-FIP3
Motif
Other DBs
NCBI-ProteinID:
BAY92753
LinkDB
All DBs
Position
complement(6107653..6109086)
Genome browser
AA seq
477 aa
AA seq
DB search
MFNDQSSLNLEPTHIDTTPEPAPELQPKKPKRLGMIALITVFAIAFGGVAWFWLLRHPSE
STETATVHLEPLEVETTTAAQESIAGDSSLTGTIESVETVTTTSRIQGQIKSLPVAEGDR
VKAGQVLAIIDVKDIQAQGNQALAAIAQAQAGVTVAAAAQTQAMASKTQAEAQLNQAEAG
QQQAEAQLQEAQAQLADAQLNQRRMTMLQKDGAVSQSQLDQANTQVALIQARIKQAKAGI
EQANRGIDRAKAGVQQASSQVKQAEAGVEQARSQVQQAKAGQQQTLANLNYGTVTAPFAG
VITKKHTEVGAIAGPGQPIVTLESTNRLRLSVAVPESLISLVRLGDEVKVQLDSVNRSVT
GHVRQIVPSANLNSRSFTVKVALDNSYKLMPGMFGRLELPRETRTVMMIPQNAVFKRGQL
EGVYVIVANDIAQLRWVKTGKVQENKVEIVSGLEAGDRVITSNVEELRDGQQVVANQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgatcaatcgtccctcaacttggaaccaactcatatagacactaccccagaa
ccagccccagaactacaacccaaaaaacccaagcggctggggatgattgctttgattact
gtttttgcgattgcatttgggggtgtggcttggttctggttattgcgtcatccttccgaa
tcaacggaaactgcaacggtgcatcttgaacctctagaggtggaaactacaacggctgct
caagaatctatagcgggtgacagcagcctcactggtactatcgaatctgtggaaactgtc
accactaccagccggattcaaggacaaattaaaagtctcccagtggcagaaggcgacaga
gtcaaagccggtcaagtcttggctattattgatgttaaagatatccaagcccaagggaat
caggcattagctgcgatcgcccaagcgcaagcgggtgtgacagtggcggcggcggcgcaa
acccaagcaatggctagcaaaactcaggcagaagcccagttaaatcaagccgaagccgga
caacaacaagccgaagctcaattacaagaagcccaagcacaattagctgatgcccaatta
aatcaacgccgcatgacaatgctgcaaaaagatggtgcagttagtcaatcacagttggat
caggcaaatacacaggtagcattaattcaagcgcggattaaacaagccaaggcgggaatt
gagcaagccaaccggggaattgatcgcgccaaagctggtgtacaacaagccagttcccaa
gtcaaacaagccgaagctggagtagaacaagcacgttcccaagtccaacaagccaaagcc
ggacaacagcaaaccctcgctaacttaaactatggcactgtcaccgcacccttcgcaggt
gtgattaccaaaaaacatacagaagtcggtgcgatcgccgggccaggacagccgatagtg
acattagaaagcactaatcgactacgtttaagtgttgcagttcccgaatccttaatttcc
ttagttagattgggagacgaggtgaaagtacagctagatagtgttaaccgttccgttact
ggtcacgtgcggcaaattgtaccttctgctaacttaaattctcgtagttttaccgtgaaa
gtcgccttagataattcctataaattaatgccgggaatgttcggacgcttagaattaccg
agggaaactcgcacagtgatgatgattccgcaaaatgctgtgtttaagcgtggtcaatta
gaaggagtatatgtaattgtggctaatgatattgctcaattacgctgggtaaaaaccggg
aaagtgcaagagaacaaagtagaaattgtctccgggttagaagcaggcgatcgcgttatt
actagcaatgttgaagaactgcgtgatggacagcaggttgttgctaatcaataa
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