Mesomycoplasma dispar: MDIS_03550
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Entry
MDIS_03550 CDS
T03700
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mds
Mesomycoplasma dispar
Pathway
mds03030
DNA replication
mds03410
Base excision repair
mds03420
Nucleotide excision repair
mds03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MDIS_03550
03410 Base excision repair
MDIS_03550
03420 Nucleotide excision repair
MDIS_03550
03430 Mismatch repair
MDIS_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mds03032
]
MDIS_03550
03400 DNA repair and recombination proteins [BR:
mds03400
]
MDIS_03550
Enzymes [BR:
mds01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MDIS_03550
DNA replication proteins [BR:
mds03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MDIS_03550
DNA repair and recombination proteins [BR:
mds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MDIS_03550
NER (nucleotide excision repair)
GGR (global genome repair) factors
MDIS_03550
MMR (mismatch excision repair)
DNA ligase
MDIS_03550
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MDIS_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
PTCB-BRCT
DNA_ligase_ZBD
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AJR12413
UniProt:
A0AAJ5NMW2
LinkDB
All DBs
Position
complement(954962..957025)
Genome browser
AA seq
687 aa
AA seq
DB search
MENNSKIRDEILELREKIENWNHHYYQLQNPLVDDLIYDKELKKLIALEQKYYYLFNLEE
LNSSPTQQVGTKITSKFEKVRHSSPMLSLNKAYTDSELEKWAQKATLILENVTFFVEPKI
DGISLSLFYKNGNLVQALTRGDGVFGENVLINTLKISDKFIPKKIDYFADLEIRGEIYID
NSTFSNLQLESKMFKNPRNAASGILRRYKKHKKENENQQEKETDFNYLSGFFYTLINPEK
HKINSQSDAVEFLKKLSFPVNDFQKKCVNLKDVFDFINKIKEKREVLNYNIDGVVVKINE
FSIYDELGSTSKFPHSAIAFKFEDDVVKTRLLEIFPTIGRTGKVTYNAKIKPVTLAGTVV
SSAVLPNYSYIENLKLNLNSDVYVKKAGEIIPQIIGSVFNHQKTNFLVVENCPKCNSKLV
YSDSGLDQFCPNQLCPEIILQKIVHFCSKAALNIETLAEKRIKILLEKKIISNPCDIFHL
KDKLEQIHSEFNNRQTSEDKKNPPSLQIKSIMKLLNEVEKAKNIDFYRLIFGLGIKNVGL
KAAKILATYAKNISELRNLDFNSLQSQYDFGPVIIESLQDYFNNPTNLDLLNCLEKVGFD
FKQTLVIDQSNAWASFAISGKLTKSRNDFVKIIEESGAIFHQSVTKKTDFLLLGEDAGSK
IEKAKKTGVKIINESEFFELIEKKQKI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataacagcaaaatacgtgatgaaattcttgaattaagagaaaaaattgaaaat
tgaaaccatcattactaccaactgcaaaatccacttgtcgacgatttgatttatgacaaa
gaattaaaaaaattaattgcactagaacaaaaatattattatctttttaatttagaagaa
ctaaatagttcgccaactcaacaagttggcacaaaaattacttccaaattcgaaaaggtt
aggcattcaagcccgatgttgtcattaaataaggcttatacagattcagaattggaaaag
tgagcacaaaaagcaacactaattttagaaaatgttactttttttgttgaacctaaaatt
gatggaatttctctttcgcttttttacaaaaacggaaatttagttcaagcattaactcgt
ggtgatggtgtttttggtgaaaatgttttgattaatactctcaaaattagtgataaattt
atccctaaaaagatagactattttgctgatttggaaattagaggagaaatttacattgat
aattccacattttcaaatttgcaacttgaatcaaaaatgttcaaaaatccacgaaatgcc
gcaagtggaattttgcgccgttataaaaaacataaaaaggaaaatgaaaatcaacaggaa
aaggaaaccgattttaattatttaagtggttttttttacaccctaattaatccagaaaaa
cataaaattaactcgcaatctgatgctgttgaatttttgaaaaaactgagctttccagta
aatgatttccaaaaaaagtgtgtaaatttaaaggatgtttttgattttatcaacaaaatc
aaagaaaaacgagaagtactaaattataatattgacggtgttgtagttaaaatcaacgaa
ttttctatttatgatgaattaggttcaacttctaaattccctcatagtgcaatcgccttt
aaatttgaagatgatgtcgtaaaaacaagacttttagagatttttccaacgattggcaga
actggaaaagtaacttacaatgcaaaaattaaacctgtaacacttgcaggaacggtagtt
tcatcggcagttttaccaaattattcctatattgagaatttaaaattaaatttaaattcc
gatgtatatgtcaaaaaagctggtgaaataattccgcaaattattggcagcgttttcaat
caccaaaaaacaaactttttagtagttgaaaattgtccaaaatgtaactcaaaattagtt
tatagtgattctggcttggatcagttttgtccaaatcaactatgtcctgaaattattttg
caaaaaatagtccatttttgttcaaaagcagcgctaaacattgaaactctagcggaaaaa
aggataaaaattcttttagaaaaaaaaataatttccaatccctgcgatattttccatcta
aaagataaacttgaacaaattcattctgaatttaacaataggcaaactagtgaagataaa
aagaatccaccatccttgcaaattaaatcaattatgaaacttctaaatgaagttgaaaaa
gcaaaaaacatcgatttttatagactaatttttggtttaggaataaaaaatgtcggacta
aaagctgccaaaattcttgcaacctatgcaaaaaatatttcagaattaagaaatttggac
tttaattctcttcaaagtcaatatgactttggtccagtaattatcgaatcactacaagat
tattttaataatccaacaaatttagatttgctaaattgtcttgaaaaagttggttttgat
tttaaacaaactttagttattgatcagtcaaacgcttgagctagttttgcaatttcagga
aaattaacaaaatctcggaatgattttgttaaaattatcgaagaatcaggcgcaattttt
catcaatcagtgacaaaaaaaacagactttcttttattaggcgaagatgctggttcaaaa
atagaaaaagcaaagaaaactggtgtaaaaattattaatgaatctgaattttttgaacta
attgaaaaaaaacaaaaaatatag
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