Myotis daubentonii (Daubenton's bat): 132228532
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Entry
132228532 CDS
T10294
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
132228532 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdt03400
]
132228532 (LIG4)
Enzymes [BR:
mdt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
132228532 (LIG4)
DNA repair and recombination proteins [BR:
mdt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
132228532 (LIG4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
132228532
NCBI-ProteinID:
XP_059541076
LinkDB
All DBs
Position
2:complement(189332253..189339823)
Genome browser
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRADKIRHFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDILDSVATNNSAKRKDLVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGFSQQTVFSLFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSPFKPMLAAIADIGRIEKDMKNQSFYIETKLDGERMQMHKDGDVYEYFSRNGYKYTE
QFGASPHEGSLTPFIHDAFRTDIQICILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILNSILTPVPGRIEIVEKTQAHTNKEVIEALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKHASGEKPSVFHTLCRIGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCNSVIVQIKASEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHLYVGGGDEPQVKKRKAPSKIKKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGINGHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPHFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKDSSEQTPKEMASVIADLEYRYSWNCSPLNMFRNHTIYLDLYTVINDLTTKIEGTRLAI
TALELRFHGAEVVSCLAKGVSHVIIGEDHSRVADFKAFRRTLKRKFKILQEGWVIDSIDK
CELQDENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagataaaatcagacacttcagg
gaatttttagattcttggagaaaattccatgatgcccttcataagaaccagaaagatgtc
acagactctttttatcctgcaatgagacttattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaacaatgcttgctaagctttatattgaattgctcaatttacct
aaagatggaaaagatgctcttaaacttttaaattacaggacacctactggaactcgtgga
gatgccggagactttgccatgattgcatactttgtattgaaaccaagatgtttacagaaa
ggaagcctaaccatacagcaagtaaatgacattttggactcagttgccaccaataattct
gccaaaagaaaggacctagtaaagaagagtcttcttcagctaataactcagagctcagca
cttgaacaaaagtggctaatacgaatgattgtgaaggacttaaagctaggttttagtcag
caaactgtattttctctttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcatgacccttcaatagggctcagtgatatctctatc
actttattctctccctttaaaccaatgctcgctgcaatagcagatattgggagaattgag
aaggacatgaaaaaccagagtttctatattgaaaccaagctagatggcgagcgtatgcaa
atgcacaaagatggggatgtatatgaatatttctcccgaaatggctataaatatacagaa
cagtttggtgcttctccacatgaaggttctcttacaccattcattcatgatgcattcaga
acagatatacagatttgtatccttgatggtgagatgatggcctacaatcctaatacacaa
acttttatgcagaaggggaataagtttgatattaaaagaatggtagaagattctgatctg
cagacttgttattgtgtttttgatgtattaatggtcaataataaaaagctaggacatgaa
accctgagaaagagatacgaaattcttaatagtattttaacaccagtaccaggcagaata
gaaatagtggaaaaaacacaagctcatactaataaagaagtaattgaggctctgaatgaa
gcaatagataaaagagaagagggaatcatgataaaacatcctctatccatttataagccg
gacaaaagaggtgagggatggttaaaaattaaaccagagtatgtcaatggcctcatggat
gaactggacatcataattgtggggggctattggggtaaaggttcacggggtggaatgatg
tctcattttttgtgtgctgtcgcagagaagcatgcttctggtgaaaaaccatctgtgttt
catactctctgtcgtattggctcaggttacaccatgaaagaactgtatgatctaggtttg
aaactggccaagcattggaagccttttcataaaaaagctccaccaagtagcattttatgt
ggaacagagaagccagaagtgtacattgagccttgtaattctgtcatcgttcagataaaa
gcatcagagattgttcccagcgacatgtataaaactggctgcactttgcgttttccacga
attgaaaagatcagagaagacaaagagtggcatgagtgcatgactctggatgacttagaa
caacttcgagggaaagcatctggaaagcttgcgtctaaacacctttatgtcggtggtggt
gacgaaccccaagtaaaaaagcggaaagctccctccaaaattaagaaagttattggaatt
attgagcacttaaaagcacctaacctttctaacgtaaacaaagtttccaatatatttgaa
gatgtggagttttgtgttatgagtggaataaatggccatccaaagcctgacctggagaac
agaattgcagaatttggtggttatatagtacaaaacccaggcccagacacatactgtgtt
attgcagggtctgagaacataagagtgaaaaatataatttcttcaaataaacatgatgtt
gtcaagcccgagtggctgttagaatgttttaagaccaaaagctgtgtgccatggcagcct
cactttatgattcatatgtgcccatcaacaaaacaacattttgcccgtgaatatgattgt
tatggtgatagttattttgttgatacagatttgaaccaactgaaggaagtattctcagga
attaaagattctagcgaacagactcctaaagaaatggcctctgtgattgctgatttagag
tatcgatattcctggaactgctctcccttgaatatgtttcgaaatcacaccatttatttg
gacttgtatactgttattaatgacttgactaccaaaatcgagggaacaagattagctatt
acagccttagagcttcgatttcatggagcagaagtagtttcttgtttagctaagggagtg
tctcatgtaatcattggggaggatcatagtcgtgttgcagattttaaagcttttcgaaga
actcttaagagaaagtttaaaattctgcaagaaggttgggtaattgattcaatagacaaa
tgtgagttacaggatgaaaatcaatatttggtttaa
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