Myotis daubentonii (Daubenton's bat): 132234251
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Entry
132234251 CDS
T10294
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03018
RNA degradation
mdt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132234251
09123 Folding, sorting and degradation
03018 RNA degradation
132234251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132234251
03041 Spliceosome [BR:
mdt03041
]
132234251
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132234251
mRNA degradation factors
5'-3' decay
Lsm complex
132234251
Spliceosome [BR:
mdt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132234251
Complex C
U2 snRNP components
132234251
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
132234251
NCBI-ProteinID:
XP_059551276
LinkDB
All DBs
Position
5:complement(40711351..40711680)
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AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaactaccaacactgtagaagagcccctggatctt
atcaggctcagcctggatgaacgaatttatgtgaaaatgagaaatgacagagagcttaga
ggtagattacatgcttatgatcaacatttaaatatgatattgggagatgtggaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatatataaatcaacaaaacgg
aatattccaatgctttttgtccggggagatggtgttgtcctagttgcccctccattgaga
gttggttga
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