Mogibacterium diversum: C5Q96_00475
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Entry
C5Q96_00475 CDS
T05355
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mdv
Mogibacterium diversum
Pathway
mdv03030
DNA replication
mdv03410
Base excision repair
mdv03420
Nucleotide excision repair
mdv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5Q96_00475
03410 Base excision repair
C5Q96_00475
03420 Nucleotide excision repair
C5Q96_00475
03430 Mismatch repair
C5Q96_00475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdv03032
]
C5Q96_00475
03400 DNA repair and recombination proteins [BR:
mdv03400
]
C5Q96_00475
Enzymes [BR:
mdv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
C5Q96_00475
DNA replication proteins [BR:
mdv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C5Q96_00475
DNA repair and recombination proteins [BR:
mdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
C5Q96_00475
NER (nucleotide excision repair)
GGR (global genome repair) factors
C5Q96_00475
MMR (mismatch excision repair)
DNA ligase
C5Q96_00475
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C5Q96_00475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
PTCB-BRCT
HHH
BRCT_2
DNA_ligase_ZBD
HHH_8
Nlig-Ia
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AVM47417
UniProt:
A0A2S0L2E3
LinkDB
All DBs
Position
103334..105295
Genome browser
AA seq
653 aa
AA seq
DB search
MNLDDKKRRIEELIETLNKASAAYYDEASEIMSNYEYDALYDELESLEKKTGYTPLNSPT
KNVGYTVQSELPKERHRSRMLSLDKTKSREELAAWLGDHEGLLSWKLDGLTVVLTYEGGE
LVKAVTRGNGDIGEVITPNARVFVNVPKHIPYKGHAVIRGEAVITYEEFDRINEAIDDAD
AKYKNPRNLCSGSVRQLNSKITAERNVRFYAFTLSEADGVDYEGLRSNQMKWMAEQGFDV
VEYVKVDNKSIFEAIDNYAERVHSFEIPSDGLVLTLEDLEYAATLGTTAKFPRDSLAFKW
ADQQAETILREIEWSPSRTGLLNPIAIFDPVELEGTTVKRASVHNLNIMETLKLGIGDTI
TVYKANMIIPQIGDNLTKSGNIELPSHCPVCDGTTEIKLMTGTKVLTCTNPNCLAKQVKR
FSLFVSRDALNIEGLSEQTLLKFIGLGYIKSFADIFRLENHRDEIVELDGFGKKSYDKLS
SSIEKSRHTVPARILVALGIPGVGVTTAAQIARAYENKWAKISSLTYDELISVSGIGEVM
ARDYEAFFADEHNKSVVLDLVSELDIDESYEKAGEALSGEIFVITGSLEHYKSRTELKKE
IEAQGGKVAGSVSKNTSYLVTNNPESGSSKNKAAAELGVKIITEDEIRTMLGY
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgatgacaagaagagaaggatagaggagttaatagaaactcttaacaaggct
tcggcagcgtactatgacgaggctagtgagattatgagcaattacgaatacgatgcgctg
tacgatgagcttgaatcgcttgagaagaagacggggtatactcctctgaatagtccgact
aagaatgtcggctacacagttcagtcggagctccctaaggaaaggcacagaagccgtatg
cttagccttgataagactaagagccgtgaggaactcgcggcttggcttggggatcatgaa
ggactcttatcatggaagctcgacggtttaaccgttgtgctcacatatgagggaggagag
ctagtcaaggccgtgacacgtggaaatggggatatcggagaggttatcacgcctaatgca
cgtgtatttgtcaatgtaccgaagcacattccttacaaagggcatgctgtaatccgtggc
gaggcggttattacctatgaggaattcgatagaatcaatgaggcaatcgacgatgcagat
gcgaagtataagaatccgagaaacctatgcagcggaagcgtaaggcagctaaatagcaaa
attaccgctgagagaaatgttaggttctatgctttcacgctcagcgaagcagatggagtt
gattatgaaggccttagatcaaaccaaatgaagtggatggcggagcaaggcttcgacgtg
gttgaatacgtgaaagtagataataagagtattttcgaagcgatagacaattatgcagag
agagtgcatagctttgagatcccgtctgatggcctcgtgctgacattagaggatttagaa
tatgcggctacacttggaacgaccgcgaaatttccgcgtgattctctggctttcaagtgg
gcagatcagcaagcggagacaattctccgtgaaatcgaatggagcccatcgagaactggg
ctgctaaatccaattgctatatttgacccggtagaactcgaaggaaccacagttaagaga
gcatcggttcataatcttaatataatggaaaccctaaagctaggcatcggtgatactatc
accgtatacaaggcgaatatgataataccgcagattggtgataaccttactaagagtggg
aatattgagcttcctagccattgtccggtatgcgatggtactacagagataaaactgatg
accggcacaaaggtacttacatgcaccaatccaaattgcctggctaagcaggtgaagaga
ttttctctattcgtatcgagggatgcgcttaatatcgagggactatctgaacagaccttg
ctaaagttcataggactcggttatatcaagtctttcgctgatatattccgactagagaat
catagggatgaaatcgtagaattagatggtttcggtaaaaagtcatatgataaattatca
tcatcgatagagaagtctcgccatacagtcccagctaggattcttgttgcacttggtata
cctggagttggtgttactactgcagctcagattgcgagagcgtatgagaataaatgggct
aaaatttcttcgctcacttacgatgaacttatatccgtaagtggcatcggagaagttatg
gctagagactatgaggctttttttgcagatgaacacaacaagtctgtcgttttggattta
gtgagcgaactcgacatagatgagagctatgagaaggccggggaagctttgtcgggtgaa
atctttgtaataactggcagccttgaacattataagagccgcactgaacttaagaaggaa
atcgaggcacagggaggtaaggttgcaggaagcgttagtaaaaacaccagctatctcgtg
accaacaatcctgaatcaggttcgtctaagaacaaggcagcagcggaactcggtgtaaaa
atcataacagaagacgaaattcgtacgatgctcggatattag
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