Methylorubrum extorquens AM1: Mex_1p0411
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Entry
Mex_1p0411 CDS
T00921
Symbol
nth
Name
(GenBank) endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mex_1p0411 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p0411 (nth)
Enzymes [BR:
mea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Mex_1p0411 (nth)
DNA repair and recombination proteins [BR:
mea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mex_1p0411 (nth)
Prokaryotic type
Mex_1p0411 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ACS38354
UniProt:
C5AT44
LinkDB
All DBs
Position
435220..435921
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AA seq
233 aa
AA seq
DB search
MPALAAGVETSPEPVDDATLVEIFSRLRAADPEPRSELEYLNPYTLLVAVVLSAQATDKS
VNLATAPLFAIADTPQKMLDLGEEQVRHFIRTIGLFNTKAKNVIALSRILLERHGGAVPC
EAEALEVLPGVGTKTASVVLNVAFGVPRIAVDTHIFRVSNRIPLFSAATTDRVQAGLEAR
VPEPFRLNAHHWLILHGRYICKARRPECPRCSIADLCRYPSKTTALTPISAGD
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctggcggccggcgtcgaaacctcgcccgaacctgtcgatgacgcgaccctg
gtcgagatcttttcgcggttgcgcgcggccgatccggagccacgttcggaacttgaatac
ctgaatccttacacgctgctcgtcgccgtggtgctctcggctcaggccaccgacaaaagc
gtgaacctcgcaaccgccccgctcttcgccatcgccgacacgccgcagaagatgctggat
ctcggggaggagcaggtccgccacttcattcgcaccatcggcctgttcaacaccaaggcg
aagaacgtcatcgcattgtcgcggattctgctggagcggcacggcggcgcggtgccgtgc
gaggccgaggccctggaagtgctgccgggcgtcgggacgaagacggcgagcgtcgtgctc
aacgtagccttcggcgtgccgcggatcgcggtcgatacccacatcttccgcgtctcgaac
cgcattcccctgttttccgcagcgacgaccgacagggtgcaggcggggctggaggcgcgg
gtgccggagccgttccggctcaacgcacatcactggctgatcctgcacgggcgctacatc
tgcaaggcccgccggccggaatgtccgcgttgcagcatcgctgatctgtgccgctacccc
tcgaagacgacggcacttacccccatatcggccggggattag
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