Methylorubrum extorquens AM1: Mex_1p3003
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Entry
Mex_1p3003 CDS
T00921
Symbol
arcB
Name
(GenBank) ornithine cyclodeaminase (OCD)
KO
K01750
ornithine cyclodeaminase [EC:
4.3.1.12
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00330
Arginine and proline metabolism
mea01100
Metabolic pathways
mea01110
Biosynthesis of secondary metabolites
mea01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Mex_1p3003 (arcB)
Enzymes [BR:
mea01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.12 ornithine cyclodeaminase
Mex_1p3003 (arcB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OCD_Mu_crystall
KARI_N
Shikimate_DH
DUF1287
Motif
Other DBs
NCBI-ProteinID:
ACS40751
UniProt:
C5AVR5
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All DBs
Position
3136735..3137739
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AA seq
334 aa
AA seq
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MAALLRREGPEPILRRLIDELRADFLRWPEFDLAPRLASHSAGGVIELMPIADAQLYSFK
FVNGHPGNTRLGKQTVVAFGMLADVATGYPLLICEMSLLTALRTAATSALAASRLARPES
RSMALIGTGAQAEFQALAFKLALGISEIRLFDVDPAAMAKARANLEGHGLRLVCAHSIGE
AVTGADIVTTATADKTRATILTPGLVEPGQHLNAIGGDCPGKTELHSDIVARARTIVEYE
PQSRIEGEIQQMPADYPVTELWRVLRGDAPGRVGRDEITLFDSVGFALEDFSALRCLRAI
AGSGPGLDIIPDPNDPKDLFGSVFSPGVGFEKAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgctacgccgggagggaccggagccgatcctgcgtcgtctcatcgacgaa
ttgcgcgccgatttcctgcgctggcccgagttcgatctcgccccgcgcctcgcgagccac
tcggccggcggggtgatcgagctgatgccgatcgcggacgcgcagctctacagcttcaag
ttcgtcaacggtcatcccggcaatacccgtctcggcaagcagacggtcgtcgccttcggc
atgctcgccgacgtggcgacgggttatccgctgctgatttgcgagatgagcctgctaacg
gccctgcgcacggcggcgacctcggcactcgcggcctcccgcctcgctcggcccgagagc
cgctccatggcactgatcggcaccggcgcgcaggccgagttccaggccctcgctttcaag
ctcgcactcggcatcagcgagatccggctgttcgacgtcgatccggcggcgatggcgaag
gcgcgggccaacctcgagggccatggcttgcggctcgtctgcgcccactccatcggtgag
gcggtgacgggcgccgacatcgtgaccacggcgaccgccgataagacccgcgccacgatc
ctcacccccggcctcgtcgagccgggccagcatctcaacgccatcggcggcgattgcccc
ggcaagaccgagttgcactccgacatcgtggcacgtgcccgcacgatcgtggaatacgag
ccgcaatcgcgcatcgagggcgagatccagcagatgcccgcggactatcccgttaccgaa
ttgtggcgcgtgctgcgcggcgacgcgccgggccgcgtaggccgggacgagatcaccctg
ttcgactcggtcggcttcgcgctggaggacttttcggccctgcgctgcctgcgggccatc
gccggctctgggccgggcttggacatcatccccgatccgaatgacccgaaggatctgttc
gggtctgtcttttcaccgggtgtcgggttcgagaaagcagcgtaa
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