Methylorubrum extorquens AM1: Mex_1p4295
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Entry
Mex_1p4295 CDS
T00921
Name
(GenBank) putative carbon-carbon lyase, HpcH/HpaI aldolase/citrate lyase family
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00630
Glyoxylate and dicarboxylate metabolism
mea00660
C5-Branched dibasic acid metabolism
mea00680
Methane metabolism
mea00720
Other carbon fixation pathways
mea01100
Metabolic pathways
mea01120
Microbial metabolism in diverse environments
mea01200
Carbon metabolism
Module
mea_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Mex_1p4295
00660 C5-Branched dibasic acid metabolism
Mex_1p4295
09102 Energy metabolism
00720 Other carbon fixation pathways
Mex_1p4295
00680 Methane metabolism
Mex_1p4295
Enzymes [BR:
mea01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
Mex_1p4295
4.1.3.25 (S)-citramalyl-CoA lyase
Mex_1p4295
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
ACS41931
UniProt:
C5B2B4
LinkDB
All DBs
Position
4386123..4387172
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AA seq
349 aa
AA seq
DB search
MKLPRRFFQPLAAGAPEPFRELPIKLERMIHFVPPHNEKVRARVPELAKTVDVVLGNLED
AVPADQKEAARKGFVEMARATDFAASGTGLWTRINALNSPWILDDLFTIVAEVGAKLDVV
MVPKVEGPWDIHYIDQLLAQLEARHGVTKPILVHAILETAEGVANVDAIASASPRMHGMS
LGPADLAASRGMKTTRVGGGHPDYRVLSDPKGDAERASAQQDLWHYTIAKMVDACMANGI
KAFYGPFGDFSDSAACEVQFRNAFLMGCAGAWTLHPSQVALAKTVFAPDPAEVNFASRIV
EAMPDGTGAVMIDGKMQDDATWKQAKVIVDLARLVAEKDPDLAKVYNLP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccgcgccgcttcttccagcccctcgccgcgggtgcgcccgagccgttccgc
gaactgccgatcaagctcgagcggatgatccacttcgtgccgccgcacaacgagaaggtc
cgcgcccgcgtgcccgaactcgccaagacggtcgatgtggtgctcggcaacttggaggac
gcggtccccgccgaccagaaggaggcggcgcgcaagggcttcgtcgagatggcccgcgcc
accgatttcgcggcctccggcaccggcctgtggacgcgcatcaatgccctgaactcgccc
tggatcctcgacgacctgttcaccatcgtcgccgaggtcggcgcgaagctcgacgtggtg
atggtgccgaaggtggagggcccctgggacatccactacatcgaccagttgctggcccag
ctcgaggcgcgccacggcgtgacgaagccgatcctcgttcacgccatcctcgagaccgcg
gaaggcgtggccaacgtcgacgccatcgcctccgcctcgccgcgcatgcacggcatgagc
ctcgggcccgccgatctcgcggcgtcccgcggcatgaagaccacccgcgtcggcggcggt
cacccggattaccgcgtcctgtccgatcccaagggcgatgccgagcgggcgtccgcccag
caggatctgtggcactacaccatcgccaagatggtcgatgcctgcatggccaacggcatc
aaggcgttctacggcccgttcggcgacttctccgattcggccgcctgcgaagtgcagttc
cgcaacgccttcctgatgggctgcgccggcgcctggaccctgcatccgagccaggtcgcg
ctggccaagaccgtgttcgcccccgatccggccgaggtgaacttcgcctcccgcatcgtc
gaggcgatgcccgacggcaccggcgcggtgatgatcgacggcaagatgcaggacgacgcc
acctggaagcaggccaaggtcatcgtcgatctcgcccggctcgtggccgagaaggatccg
gatctcgccaaggtctacaatctgccctga
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