Mercurialis annua (annual mercury): 126673215
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Entry
126673215 CDS
T10153
Name
(RefSeq) 5'-3' exoribonuclease 4-like isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
126673215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126673215
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
126673215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
126673215
NCBI-ProteinID:
XP_050223200
LinkDB
All DBs
Position
LG3:3320364..3331473
Genome browser
AA seq
974 aa
AA seq
DB search
MGVPAFYRWLADRYALAIVDVIEDEPKEDINGVTKPVDASKPNPNGLEFDNLYLDMNGII
HPCFHPEKRPLPPTYDDVFKSIFEYIDHIFSMVRPRKLLFMAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEEGLRKRFEAEGKLLSRTEKPETSDSNVITPGTQFMAVLSVALQYYIH
MRLNHSPGWRYTKVILSDANVAGEGEHKIMSYIRLQRNFPGFNPNTRHCLYGLDADLIML
ALATHEIHFSILREMVTFPGQQEKCFSCGQSGHLAADCPGKSGDNPLDWNAPDDAPIHKK
KYQFLHIWVLREYLQYELDIPNPPLEINFERILDDFVFMCFFVGNDFLPHMPTLEIREGA
INLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQYFENNEE
AKLKARREVSEEMQTPAADKVKLGEPGYKERYYAEKFGLTTPDEIDKVRKDVVLKYVEGL
CWVCRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGEPFKPFDQLMGTLPAASS
NALPEAYQKLMTEPSSPISNFFPSEFEIDMNGKRFAWQGIAKLPFIDERKLLGQTKKLEG
TLTEEERRRNSVMFDLLYVHPAHPMAAQVISYYKGYFGLPSSQRLAWTIDPNASGGMNGY
IWLYERNGLRSTITSPVNGLPSIERNQVLNVAYLNPANHRHIPEPPSGVIMPEKIVKTTN
VKPFPTLWHEDNSGRRQQGRERSQVPRAIAGPLLGEAAHRLLKNTLNIRPNGSPSKTFEH
QPYSNLPGHPTYNRPRPAGPSGYGRGYSGEPNSYYGNQNNQHGLMNNPRPILLANGVSNN
RTNFRAAHDRGQYYDQYHDGMSTLNLEENVRSRSPAVMSQRIQNTGYSPNAHQQFGQNMG
PLPSPPTKWIGKAEGNAELYFRQEIAQRVAHEKQTYQVRTPSIQERPNHQQISALNHQQI
SALNHQEISELNHQ
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgccagcgttttacaggtggcttgccgaccggtatgcactagcaattgtcgat
gtaattgaagatgaacctaaagaagacatcaatggcgtaactaaacccgttgatgcctca
aaacctaaccctaacggtttagaatttgataatttatacctagatatgaacggtatcatt
catccttgttttcatccggagaaaaggccgcttcctccgacttatgatgatgttttcaag
tcaatttttgaatacattgatcatatattctcaatggttcggcctaggaagcttctattt
atggcaattgatggagttgcacctagagctaaaatgaatcagcaacggtctcgtcggttt
cgagctgctaaagatgctgccgaagcagaagccgaggaagaagggctcagaaaaagattt
gaggctgaagggaagctgttatcccgtacagaaaagcctgaaacatccgactctaatgtt
atcacgcccggtactcaattcatggctgtgctctcagtcgcacttcagtattatatacat
atgaggttgaaccacagtccaggatggaggtatacaaaggttattctttctgatgcaaat
gttgccggtgagggagagcacaaaattatgtcgtacataagattacaacgtaactttcct
ggttttaatccgaacacacgccattgtctatatggtctggatgctgatttgattatgctg
gctttagcaacacatgaaattcacttttcaatattgagagagatggtcacatttcctggg
caacaagagaagtgtttttcctgcggtcaatctggccatctcgctgctgattgccctggt
aagtcaggggataaccctctggattggaatgcaccagatgatgccccaattcacaagaag
aaatatcagttcctccacatttgggtgttgcgagaatatttgcaatatgaattggatatt
ccaaaccctccattggagatcaactttgagagaatactggatgattttgtgttcatgtgt
ttctttgttggcaacgatttccttccgcatatgccaacattggaaattagggagggtgct
attaatttgttgatgcacgtatacagaagggagttttctgcaatgggtggttatcttact
gatgcgggtgaggttaatctagatagagttgaacattttatccagtctgttgcaatttat
gaagaacaaatctttcaaaaaaggactcgtatacagcagtatttcgagaataatgaggag
gcgaaactcaaagcaagaagagaggtctctgaagagatgcaaacacctgctgcagacaag
gttaagttaggggagcctggttacaaagaaagatactatgctgagaaatttggtctaaca
actcctgatgaaatcgacaaagttagaaaagacgtggttttgaagtatgtagaaggtttg
tgttgggtttgccgctattactaccaaggtgtttgctcttggcaatggttttatccatac
cattatgctccatttgcctctgatctgaagggtcttgctgaattggaaataaccttcttt
ttaggagagccatttaaaccctttgatcagctaatgggaaccctaccagctgcaagttct
aatgctctgccagaagcttatcagaaattgatgaccgaaccttcatcgccaatttctaat
ttttttccctcagagtttgagattgacatgaatggaaaacgcttcgcctggcagggaatt
gctaaattgccattcatagatgagaggaaattgcttggccaaacaaagaaacttgaaggc
actttaacggaggaggaacggcgccgaaatagtgttatgtttgatttactttatgtccat
cctgctcatcctatggctgcacaagtcatctcatattataaaggttattttggcttacca
tcatctcaaagattagcttggacaatagacccaaacgccagtggtgggatgaatggatat
atttggttatatgagaggaatggattgaggagtacaatcacttcccctgtcaatggattg
cccagtatagaacgtaaccaagtgttaaatgtcgcatatcttaaccctgcaaatcataga
cacattcctgaacctcccagtggcgtgatcatgcctgaaaagattgtaaaaactacaaat
gttaaaccattccccacgttatggcatgaggataatagtggtcggcgccagcaaggcaga
gaaaggtctcaagtaccacgagcaatagctggccctttattgggtgaggcagctcatcgt
cttctcaagaacacacttaatatcagacctaatggttcaccttccaaaacttttgagcat
cagccatatagtaatctcccaggccatcctacatataacagacctagaccagctggacct
tctggttatggaaggggttacagtggtgagccgaacagttattatggtaaccaaaataac
cagcacggtctgatgaataatcctagacctattctgttggcaaatggtgtgtccaacaac
cgaaccaactttagggcggctcatgataggggacaatactatgaccagtaccatgatggg
atgtctactttgaatctggaagagaatgtcagaagcaggtctccggcagtaatgtcacag
cgcatacaaaatacaggatacagtccgaacgcacatcagcagtttgggcagaacatgggc
cctcttccatcaccgcccaccaaatggatcggtaaagctgaaggaaatgctgagctgtac
ttcagacaagaaatagcccaaagggttgcacatgagaagcagacttatcaggtcaggaca
ccatcaattcaggaaaggccaaatcatcaacaaatctcagcgctaaatcatcaacaaatc
tcagcgctaaatcatcaagaaatctcagagctaaatcatcaataa
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