Methanobrevibacter sp. AbM4: Abm4_0180
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Entry
Abm4_0180 CDS
T02687
Symbol
aksD
Name
(GenBank) homoaconitase large subunit AksD
KO
K16792
methanogen homoaconitase large subunit [EC:
4.2.1.114
]
Organism
meb
Methanobrevibacter sp. AbM4
Pathway
meb00300
Lysine biosynthesis
meb00680
Methane metabolism
meb01100
Metabolic pathways
meb01110
Biosynthesis of secondary metabolites
meb01120
Microbial metabolism in diverse environments
meb01210
2-Oxocarboxylic acid metabolism
meb01230
Biosynthesis of amino acids
meb01240
Biosynthesis of cofactors
Module
meb_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Abm4_0180 (aksD)
09105 Amino acid metabolism
00300 Lysine biosynthesis
Abm4_0180 (aksD)
Enzymes [BR:
meb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
Abm4_0180 (aksD)
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Gene cluster
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Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-GeneID:
15797674
NCBI-ProteinID:
AGN16096
UniProt:
R9SJ00
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Position
complement(233644..234891)
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AA seq
415 aa
AA seq
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MNITEKILSEKVGYEVNPGEIIEANVDLVMSHDGTSPPAIKTFEKIADNVWDPEKIAIVF
DHNIPANTIGSAEFQKVARNFIKKQGITHHYINGEGICHQVLPEKGLVEPGKVIVGADSH
TCTYGAFGAFSTGMGATDIAMVYATGKTWFKVPEAIKIQVEGKLGNLTSKDIILNIIGKI
GIAGATYQSAEFCGKTIDNLDVASRMTMTNMAIEMGAKNGIMEPNDATIDYVCKRTGKSR
NQLNIKKSDKDSVYSKEYHFDINNMEEQIACPNDVDNVKPISKVEGTSIDQGVIGSCTNG
RLIDLKNAAEVLDGKKIHEDVRLIVLPASREIYLQALDKGYIKTFMESGAIVCNPGCGPC
LGAHMGVLSEGETAISTTNRNFKGRMGDPKSSVYLANSKVVAASAIKGFIAKPEN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatattacagaaaagattttatcagaaaaagtaggttatgaagttaatcctggtgaa
attatcgaggcaaatgtcgaccttgtaatgtcacatgacggtacatcaccacctgccatt
aaaacatttgaaaaaatagcagataatgtatgggatcctgagaagatagcgatagtgttt
gatcataacataccggcaaatacaattggatctgcagaattccagaaagttgcaagaaac
tttattaagaaacaaggcatcacccaccattacattaatggtgaaggtatctgccaccaa
gtacttccggaaaagggtttagtggaacctggaaaagttatagttggtgcggattcacac
acatgcacttatggtgcatttggagcattttccacaggaatgggtgcaacggatattgct
atggtttatgcaactggtaaaacatggttcaaggttccggaagctataaaaatccaagtc
gaaggtaagttaggtaatttaacctccaaggatattattctaaatataattggaaagatt
ggaattgcaggagccacctatcaaagtgcggagttctgtggtaagaccattgataacctt
gatgtggcaagcagaatgaccatgacaaacatggccattgaaatgggtgccaaaaatggt
ataatggaacctaatgatgctaccatagattatgtatgtaaaagaaccggaaaaagtaga
aatcagttaaacatcaaaaaatccgataaggactcagtttatagtaaggaataccatttc
gatataaacaatatggaagaacaaatcgcatgtccaaatgatgtggacaatgtaaaacca
attagcaaggttgagggaacctccatcgaccagggagtaattggttcttgtaccaatgga
agactaattgatttaaaaaatgccgcagaagttcttgatgggaaaaagatccatgaggat
gttagattaatagttcttccggcatcacgtgaaatatatcttcaagccctagataaggga
tatataaaaaccttcatggaatccggtgcaatagtatgtaatccgggatgcggaccatgt
ctaggagcacatatgggtgttttatctgaaggtgaaacagccatatcaactacaaacaga
aacttcaaaggtagaatgggagatcctaaatcatcagtttatcttgcaaattcaaaagtg
gttgcagcttccgcaataaaaggatttattgcaaaaccagaaaattaa
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