Methylocystis echinoides: RVU70_11995
Help
Entry
RVU70_11995 CDS
T10963
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
meci Methylocystis echinoides
Pathway
meci00909
Sesquiterpenoid and triterpenoid biosynthesis
meci01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
RVU70_11995 (shc)
Enzymes [BR:
meci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
RVU70_11995 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
RVU70_11995 (shc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Pec_lyase
Prenyltrans
TED_complement
Thioredox_DsbH
DUF6025
Motif
Other DBs
NCBI-ProteinID:
XCP54317
LinkDB
All DBs
Position
complement(2468774..2470747)
Genome browser
AA seq
657 aa
AA seq
DB search
MTAVARIDTYAPVGAEALEASIQNAKRALLELGKNDGHWCFELEADTTIPAEYVLMRHFR
AEPVDAELERKIGVYLRRTQSDRHGGWPLFQDGDFNVSASVKAYFALKMIGDDVDAPHMA
RARAAILAHGGAATTNVFTRSLLALYGEIPWRGVPVMPVEIMLLPRWFPFHLDKISYWGR
TVLVPLLVLMTRKPQAKNPKGVRIQELFVTPPEEVKVWPKGEHQTWPWAHIFGEIDKLLR
LLEPYMPKRSRELSVELAEKWTTERLNGVDGLGAIFPAMVNSLLMYDVLGIPATDQRVKD
ARESIERLLVVNETEAYCQPCVSPVWDTSLVAHALLETGDEDARERARQALDWLAPLQVL
DVKGDWAVQRPDLRPGGWAFQYANPYYPDVDDTAVVATAMDRLTANESAKPYAERIERAK
EWIVGMQSKNGGWGAFDADNAYHYLNHIPFADHGALLDPPTVDVSARCVSMLAQLGDTVE
TSDCLKRGVDYIVDDQEKDGSWFGRWGANYIYGTWSALCALNAAALPHEHAAYRRAANWL
VAIQNPDGGWGEDLSSYKLDYKVYEPAPSTASQTAWALLALMASGDVEHPAVARGVAYLQ
ATQAEHGLWNEARFTATGFPRVFYLRYHGYAKFFPLWALARYRNLVRANSKQVTVGL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagtcgcgcgcattgacacctatgcccccgttggcgccgaggcgctggaagcg
agcatccagaacgccaagcgggcgctgctcgagctcggcaagaacgacggccattggtgc
ttcgaactggaagccgacaccaccattcccgccgaatatgtgctgatgcgccatttccgc
gccgagccggtcgacgccgaactcgaacgcaagatcggcgtctatctgcgccgcacgcaa
agcgaccgccacggcggctggccgctgttccaggacggcgacttcaacgtcagcgccagc
gtcaaagcctatttcgcgctcaagatgatcggcgacgacgtcgacgcgccgcacatggcg
cgcgcgcgggcggcgatcctcgcgcatggcggggcggcgacgaccaatgtcttcacccgc
tccctgctggcgctttatggggaaattccctggcgcggcgtcccggtgatgcccgtcgaa
atcatgctgctgccgagatggtttcccttccatctcgacaagatttcctattggggccgc
acggtgctcgtgccgctgctcgtgctgatgacccggaagccgcaggcgaagaaccccaag
ggcgtgcgcatccaggagcttttcgtcaccccgcccgaggaggtgaaggtctggccgaag
ggcgagcaccagacctggccctgggcgcatatcttcggcgagatcgacaaactgttgcgg
ctgctcgagccttacatgcccaagcgctcgcgcgagctttccgtcgagcttgcagaaaag
tggacgacggagcgcctcaacggcgtcgacggcctcggcgccatcttcccggcgatggtg
aacagcctgctgatgtatgacgtgctcgggatccccgcgacggatcagcgggtgaaggac
gcccgcgaatcgatcgagcgcctgctcgtcgtcaatgagaccgaggcctattgccagccc
tgcgtctcgccggtgtgggacacgtcgctcgtcgcccatgcgctgctcgaaaccggcgac
gaggatgcgcgcgaacgcgcccgtcaggcgctcgactggctcgcgccgctgcaggtgctc
gacgtgaagggggattgggccgtccagcgcccggacctgcgtcccggcggctgggccttt
caatacgccaacccctattatcccgatgtcgacgacacggccgtcgtcgccaccgccatg
gaccgcctcaccgccaatgagagcgccaagccctatgccgagcgcatcgaacgggcgaag
gaatggattgtcggcatgcaatccaagaacggcggctggggcgccttcgacgccgacaac
gcctaccactatttgaaccacatccccttcgccgatcatggcgctttgctcgatccgcca
acggtcgacgtctccgcccgctgcgtttccatgctcgcccagctgggcgacaccgtggag
acgagcgactgcctcaaacgcggcgtcgactacatcgtcgacgatcaggagaaggacggc
agctggttcggccgctggggcgcgaattacatttacgggacctggtcggcgctctgcgcg
ctcaacgccgccgccctgccgcatgagcacgccgcctatcgccgtgcggcgaactggctc
gtcgccattcagaatccggacggcggctggggcgaggacctgtcgagctataagctcgac
tacaaggtctatgagcctgccccctccacggcctcgcagaccgcatgggcgctgctcgcc
ctgatggcctcgggcgacgtcgagcatccggcggtcgcgcgcggcgtcgcctatctgcag
gcgacgcaggcggagcatggcctctggaacgaggcgcgcttcaccgcgaccggcttcccg
cgggttttctacctgcgctaccacggctatgcgaaattcttcccgctgtgggcgctggcc
cgctaccgcaatctggtgcgcgcgaacagcaagcaggtgaccgtggggctgtaa
DBGET
integrated database retrieval system
