Methylosinus sp. C49: MSC49_00810
Help
Entry
MSC49_00810 CDS
T09855
Symbol
ragD
Name
(GenBank) hemolysin D
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
mecq
Methylosinus sp. C49
Pathway
mecq01501
beta-Lactam resistance
mecq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MSC49_00810 (ragD)
01503 Cationic antimicrobial peptide (CAMP) resistance
MSC49_00810 (ragD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mecq03036
]
MSC49_00810 (ragD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mecq02000
]
MSC49_00810 (ragD)
01504 Antimicrobial resistance genes [BR:
mecq01504
]
MSC49_00810 (ragD)
Chromosome and associated proteins [BR:
mecq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
MSC49_00810 (ragD)
Transporters [BR:
mecq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MSC49_00810 (ragD)
Antimicrobial resistance genes [BR:
mecq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MSC49_00810 (ragD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
HH_MFP_RND
BSH_CzcB
BSH_CusB
YknX_C
Beta-barrel_RND
Mt_ATP-synt_D
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
BBU60146
LinkDB
All DBs
Position
complement(94222..95499)
Genome browser
AA seq
425 aa
AA seq
DB search
MTEMSQPQGRGFASTSVGVSEAPPPRLRKLPFLVLLALLALVLLIGLRRHAAQEQDAQAF
QQEQANATLSLRATKVTKIAGPVHIELPGQTLAWEQARVFARATGYIAERRVDIGSKVKQ
GDLLVRISAPDLDQQYAQALAQLALNKAQLLQSKAQVEQGKANLNLAKLTYGRSSQLVKN
NYESKQNNDTNAANVESQAANLQSAQAGVEVAQANIAAAQANVDRLKQLVDFKDITAPFR
GVVTARNIEVGDLVSADANSGTPLFSLARDDILRVQVSVPQSEAAGLVDGLESKIVAPEM
PGKSFKGRIARNANSLAAASRTLLTEVDVPNPTGELRPGMFVRVVLDIPRPRPLVNIPAP
SILFGAEGPRVAVIGKDDVVRLAKINITRDFGTNVDVDQGLTGDETIALDPPADIRDGRK
VTIRK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagatgtcgcagccgcagggacgcggattcgcttcgaccagcgtcggcgtgagc
gaggcgccgccgccgcgcctgcgcaagctccccttcttggttcttctcgcgcttctcgcg
ctcgtgctgctcatcggcctgcgccgccatgcggcgcaggagcaggacgcgcaggccttt
cagcaggagcaggccaatgcgacgctcagcctgcgcgcgaccaaggtgacgaaaatcgcc
ggccccgtgcatatagagctgccgggccagacgctggcttgggagcaggcgagagtcttc
gcgcgcgcgacgggctatatcgccgagcggcgcgtcgatatcggcagcaaggtgaagcag
ggcgatctcctcgtgcgcatctccgcgcccgatctcgaccagcaatatgcgcaggcgctg
gcgcagctcgcgctcaacaaggcgcaactcctgcaatccaaggcgcaggtcgagcagggc
aaggccaatctcaacctcgccaagctcacctacggccgcagctcgcagctcgtgaaaaac
aattacgagagcaagcagaacaatgacaccaacgccgccaatgtcgagtcgcaggccgcc
aatctgcaatcggcgcaggcgggcgtcgaggtcgcgcaggccaatatagcggcggcgcag
gccaatgtggatcggttgaagcagctcgtcgacttcaaggacatcaccgcgcctttccgc
ggcgtggtgacggcgcgcaacatagaggtgggcgatctcgtcagcgccgacgccaatagc
ggcacgccgctcttctccctggcgcgcgacgatattctgcgcgtgcaagtgtcggtgccg
caatcggaggcggcgggcctcgtcgatggtctcgaatcgaagatcgtggcgccggagatg
cccggcaagagcttcaaggggcgcatcgcgcgcaacgccaattcgctcgccgccgcttcg
cgcacactgctcaccgaggtggatgtgcccaatcccaccggcgagctgcggccaggaatg
ttcgtgcgtgtcgtgctcgatattccgcgcccgcggccactggtgaatattccggcgccg
tcgatcctcttcggcgcagagggaccgcgcgtcgcggtgatcgggaaggacgatgtcgtg
cgcctcgcgaagatcaacatcacgcgcgatttcggcaccaatgtcgacgtcgatcaagga
ttgacgggcgacgagaccatcgcgctcgatccgcccgccgatattcgcgacggccgcaag
gtgacgatccgcaagtga
DBGET
integrated database retrieval system
