Methylocapsa sp. D3K7: QEV83_07965
Help
Entry
QEV83_07965 CDS
T08996
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk00909
Sesquiterpenoid and triterpenoid biosynthesis
medk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
QEV83_07965 (shc)
Enzymes [BR:
medk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
QEV83_07965 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
QEV83_07965 (shc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Pec_lyase
TED_complement
Motif
Other DBs
NCBI-ProteinID:
WGJ16504
LinkDB
All DBs
Position
complement(1745236..1747143)
Genome browser
AA seq
635 aa
AA seq
DB search
MDAAVSRARQALLDVQRPDGHFVFELEADVTIPAEYILFRHFLGQPADALLEAKIAAFIR
RKQAAHDGWPLFTDGPFNLSSSVKAYFALKAVGNSPDADHMRRARTAILAHGGAANANVF
TRALLALFGVLPWRGVPVMPVEILLLPRWFPFHMTKVSYWSRTVIMPLVVVNALKPRARN
PRNVTIEELFVEPPDRVRHWPGGPQQKFPWTQIFGALDNLLRWAEPYFPKSLRKRAIDQA
VAFVEEHLNGEDGLGAIYPAMAYSAMMFDALGYPRDDPRMVQILNAIDKLLVIHENEAYC
QPCVSPVWDTALASHALMEAGGDPAERSVHAGLAWLEPLQITDVVGDWAVQKPRVRPGGW
AFQYANPHYPDVDDTAVVAMAMDRAGSLKYATAIARAREWIEGLQSANGGWGAFDADNDY
DYLNYIPFADHGALLDPPTADVTARCLSMLGQLGEVPARNSAVARGLDYLLRTQEKDGSW
FGRWGMNYIYGTWSVLCAFHVLRRDLRSADIQKAIAWLKRIQNKDGGWGEGGESYDLDYT
GYRPAPSTPSQTAWALLALMAAGQVEDDAVTLGARYLAATQAEDGFWKEERFTATGFPRV
FYLRYHGYAKYFPLWAMARYRNLKTGNRPPVLAGM
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atcgacgcggcggtctcgcgcgcgaggcaagcgctgttggatgtccagcgccccgatggg
cattttgtcttcgaattggaagccgatgtcacgatcccggccgaatatattctgttccgg
cattttctcggacagccagccgatgccttgctcgaagccaagatcgccgcctttatccgg
cgcaagcaagcagcgcacgatggctggccgctgttcaccgatggccccttcaacctcagc
agttccgtcaaggcctatttcgcgctgaaagctgtgggcaatagcccggacgcggatcac
atgcggcgtgcccgcacggcgatcctcgcgcatggcggcgcagcgaacgccaatgtgttc
acccgcgcgctgcttgccctcttcggcgtgctgccttggcgcggcgtgcccgtcatgccg
gtcgagattttgctcttgccgcgctggttcccctttcatatgaccaaggtctcctattgg
agccgcacggtcatcatgcccctcgtggtcgtgaacgcgctcaagccgcgcgcacgaaat
ccgcgcaacgtcaccatcgaggaactcttcgtcgaacccccggatagggtgcgccactgg
cctggcggcccgcagcaaaaatttccctggacgcagatctttggcgcgctcgacaacttg
ctgcgctgggccgagccttactttcccaaaagcttgcgcaagcgggcgatcgatcaagca
gttgccttcgtcgaggaacacttgaatggtgaggatgggcttggcgcgatttacccggcc
atggcctattcggcgatgatgttcgacgcacttggctatccgagggacgacccaaggatg
gtccaaattctgaacgcgatcgataaacttctcgtgatccacgagaacgaagcctattgc
cagccctgcgtctcgccggtgtgggatacggcgcttgcgtcgcacgccttaatggaggcc
ggcggcgaccctgctgagaggtctgttcatgccggtcttgcctggctcgaacccttgcaa
atcaccgatgtcgtgggggattgggccgtgcaaaagccgcgggtccggccgggcggctgg
gcgttccaatatgccaatccgcactaccccgatgtcgacgataccgctgtcgtcgcgatg
gcgatggatcgcgccggctctttgaaatacgcaaccgcaattgcgcgggcgcgcgagtgg
atcgaaggcctgcagagcgccaacggcggctggggcgctttcgatgctgacaatgactat
gattatttgaactatatccccttcgctgatcacggagccttgctcgatccgccgacggcg
gatgtaacagcccgctgtctgtccatgctgggccagcttggggaggttccagcccgcaat
tccgctgtcgcgcgcggcctcgattatctcttgcggactcaggaaaaggacggcagctgg
tttggccgctggggaatgaattatatctatggaacttggtcggtgctttgcgcgtttcat
gtgctgcggcgcgatctgcgcagtgcagacatccagaaagcgattgcttggttgaaacgc
atccaaaacaaggatggcggctggggcgaaggcggcgagagttacgatctggactatacg
ggctacaggccggcacccagcacgccgtcgcagacggcatgggccttgcttgcgttgatg
gccgcgggtcaggtcgaagacgatgcggtcactttgggggcgcgctatcttgcggcgacc
caggcggaggacggattttggaaggaagagcgttttaccgcgacgggttttccccgggtg
ttttatctacgctatcatggttacgcgaaatatttcccgctgtgggcgatggcgcgctac
cgcaatctcaaaaccggcaaccgtcctccagtgctggcgggcatgtga
DBGET
integrated database retrieval system
