Methylocapsa sp. D3K7: QEV83_13445
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Entry
QEV83_13445 CDS
T08996
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QEV83_13445 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
medk03400
]
QEV83_13445 (nth)
Enzymes [BR:
medk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QEV83_13445 (nth)
DNA repair and recombination proteins [BR:
medk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QEV83_13445 (nth)
Prokaryotic type
QEV83_13445 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Smr
Motif
Other DBs
NCBI-ProteinID:
WGJ13685
LinkDB
All DBs
Position
complement(2853095..2853781)
Genome browser
AA seq
228 aa
AA seq
DB search
MPKAGKRGPNTPRAQQNLPNSATIAEIFQRFEAANPHPEGELAYINPFTLLVAVVLSAQA
TDTGVNKATRALFASADSPEKMLALGEDKVRAMIQTIGLFRAKARNVIALSERLLKDFNG
EVPRTRDALETLPGVGRKTANVVLNIAFGVPVIAVDTHVFRVSNRIPLAPGKTPLEVETG
LEKIIPDAYKRHAHHWLILHGRYICKALRPECPRCLISDLCQWPDKRA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagcgggcaagcggggacccaacacgccacgggcgcagcaaaatctacccaat
tcggcaacaatcgccgaaattttccagcgcttcgaagccgctaacccgcatccggaagga
gaactcgcctatatcaatccgttcacccttcttgtcgcggtcgtgctttcggctcaggcg
accgacaccggggtcaacaaggcaacgcgcgcgctctttgccagcgccgacagtccggag
aaaatgttggcgctcggcgaggacaaagtccgggctatgattcagacgatcggtcttttc
cgggccaaggcacgcaatgtcatcgccttgtcggagcggcttctcaaggacttcaacggc
gaggttccgcgaacccgcgatgcgctcgaaacgcttcccggagttggccgcaagactgcc
aatgtggtcttgaacatcgcatttggcgttccagtgatcgccgtcgacacgcatgttttc
cgggtctcgaaccggattccgctggcgccgggcaagacgccgctggaggttgaaactggg
ctggaaaaaatcattcccgatgcctacaaacgccacgcgcatcattggctgatcctgcac
ggccgctacatctgcaaggcgctgcgcccggaatgcccgcgctgtctcatttccgatttg
tgccagtggccggacaagcgtgcgtga
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