Methylophilus sp. DW102: MTDW_26620
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Entry
MTDW_26620 CDS
T10702
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
medz Methylophilus sp. DW102
Pathway
medz01501
beta-Lactam resistance
medz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
medz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MTDW_26620
01503 Cationic antimicrobial peptide (CAMP) resistance
MTDW_26620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
medz02000
]
MTDW_26620
01504 Antimicrobial resistance genes [BR:
medz01504
]
MTDW_26620
Transporters [BR:
medz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
MTDW_26620
Antimicrobial resistance genes [BR:
medz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MTDW_26620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
DUF3627
SecD_SecF_C
UBA_At5g58720
Motif
Other DBs
NCBI-ProteinID:
BEV09362
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All DBs
Position
2857171..2860359
Genome browser
AA seq
1062 aa
AA seq
DB search
MLNIFLKRPVLAIVLSLLLTFTGFLSIKSLPVEQFPDIAPPRVLIFLAYPGSSASVLVQS
SLITLERAINGVPGMKYIVSDATSAGEATIQVYFDQGVDPNEAMVNTKVRLDQVINRLPQ
LVQLEGVILNKVQPSMLMYVNMYSTDKNADQKFLYNYSQINVIPEIQRVNGIAWAQILGS
RQYAMRVYLNPDRMRAYNVSSKEVMDAMSNQSLIGRPGRLGQSSGLQAQAKEYTLVYSAS
RYEKPEQYENIVIRSTPSGEILRLKDIAKVMLGSEFYDIYSNKDGYPSASIVLKQNYNTN
AKEVIENVKKTLEELKPTFPAGMTYEINYDVSRFVDASIHKVLHTLVEAFVLVSLVVFIF
LGDWRSTLIPLIAVPISLIGAFAVMSSFGLSINLITLFAMVLAIGVVVDDAIVVVEAVHA
KMASDHVGPYAAVQRVLGEIGGAVVAITLLMTSVFVPITFLPGPVGVFYRQFAITMASSI
VLSGIIALTLTPVLCAMILKNTHGQPRSRNPINLFLDLFNKGFDKVTDYYTAFLEKLVTQ
RTITFLVIGLFSFGIVSIVKIIPEGFIPGEDQGMIYAIIQTPPGSTLETTYQVSQELQKV
AKKIPAVQSVTALAGYEVLTEGRGSNAGTCIINLKDWEERKETVADVLKLLEKATENFGA
RIEYFEPPAVPGYGTASGLAFRLLDKTGSLDYQKFDDINKDFMKALAKRKELTGLFTFYA
ANYPQYDLIIDPQRAMQKKVTIADAMDNLDVLVGSTFELAFIRFNYYFRVYTQAAPEFRR
FPSDILNYYVRNEDGEMVPYSAFMTMKKQQGPNEITRYNLFNSAALRAEPAEGYTTASAI
NAIKEAAKSLPKGYSVGWEGLSFDEERRGNENIIIFMVVLVFVYMVLAAQYESFIIPFAV
MLSLPVGIFGSFLLLKMAGLANDVYAQIGLIMLVGLLGKNAVLIVEFAVQAREKGASIKE
AAIAGAKARFRPILMTSFAFIAGLIPLTVATGAGAIGNRTIGTSALGGMLFGTLFGVVVI
PGLYYIFASLADGKTLIRKEDQNPLTESYEYNRHEEEDEHDH
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacatattcctcaaacgcccagtactggccatcgtactgtccctgctcctgacg
tttactggattcttgtccattaaaagtctgccggtcgagcagtttccagacattgcgcca
ccgcgcgtattgatcttcctggcttatcctggctccagcgccagcgtgctggtgcaatcg
tcactgattacactggagcgcgccattaacggtgtgcccggcatgaaatacatcgtgtcc
gacgcgaccagtgcgggtgaagccaccatccaggtctattttgaccagggggtagacccg
aacgaagcgatggtgaacaccaaggtcaggctggaccaggtcatcaaccgtctgccacag
ctggtacaactggaaggggtgatcctgaacaaggtacagcctagcatgttgatgtacgtg
aacatgtacagtaccgataaaaacgcggaccagaaattcctctacaactactcacaaatt
aacgtgattcctgaaatccagcgcgtgaacggcattgcctgggcgcagattttgggtagc
cgtcaatatgccatgcgggtgtatttaaacccggaccgcatgcgggcttacaacgtgtct
tccaaagaagtcatggatgcgatgtccaaccagagtttgattggtcgtccaggccgtttg
gggcaaagctcggggctgcaggcgcaagccaaagaatacaccctggtgtatagcgccagc
cgctatgaaaagcctgagcaatatgaaaatattgtgattcgctccaccccctcaggtgag
attctgcgcctgaaagacattgccaaagtcatgctgggcagtgagttctacgacatttac
tccaacaaagacggttatccttctgcctcgattgtgttgaagcaaaactacaacaccaac
gcgaaagaagtgattgaaaacgtcaagaaaacgctggaagagctcaaacccaccttccca
gctggcatgacctatgaaatcaactacgacgtgtcacgctttgtagatgcttctatccac
aaggtcttgcatacgctggttgaagcgtttgtgctggtatcactggtggtgttcattttc
ctcggtgactggcgctctaccctgattccgttgatcgcggtgcccatctcgctgatcggg
gcgtttgcagtgatgagctcgtttggcttgagtatcaacctgattacgctgtttgccatg
gtgctggcgatcggggtggtcgtggacgatgcgattgtggtggtggaagcggtgcacgcc
aaaatggcttctgaccatgtcggcccttacgccgcagtacaacgtgtattgggtgaaatc
ggcggcgcagtggtcgcgatcaccttgctgatgacctcggtatttgtgccgatcaccttc
ctgccaggtccggtgggtgtgttctaccgccagtttgcgatcaccatggcgtcctccatc
gtgttgtcaggcattattgcgctgaccctgaccccggtgctgtgcgcgatgatcttgaag
aatacgcatggccagcccagaagccgtaacccgatcaacctgtttttggacctgttcaac
aagggctttgacaaggtgaccgactactatacggccttccttgaaaaactggtgactcag
cgcacgatcacctttctagtgattgggctgttctctttcgggattgtttcgattgttaaa
atcattccagagggcttcattcccggtgaagaccagggcatgatttatgcaattatccag
acccctccaggctcaacactggaaaccacctatcaggtgtcacaagagctgcaaaaagta
gcgaagaaaattcctgcagtgcagtctgtgaccgccttggcgggttacgaggtgctgacc
gaagggcgcggttctaacgcgggtacttgtattatcaacctcaaggactgggaagaacgt
aaagagacggttgccgacgtactcaaattactggagaaagccaccgaaaactttggcgcg
cggattgaatactttgaaccgcctgcagtgcctggttatggtaccgcttccggtctggcc
ttccgcttgttggataaaaccggctcgctggattaccagaagtttgatgacatcaacaaa
gacttcatgaaggctctggcaaaacgcaaagaattaaccggtttgtttaccttctatgcg
gccaactatccacagtacgacttgatcattgatccgcaacgtgccatgcagaaaaaagtc
acgattgccgatgcgatggacaacctcgatgtgctggtgggcagtacctttgagctggca
ttcatccgctttaactactacttccgggtgtatacccaggctgcgcctgagttccgccgc
ttccctagcgacatcctgaactactatgtacgcaatgaagatggcgagatggtgccttac
tcagccttcatgactatgaagaaacaacagggtcctaacgaaattacccgttacaacctg
tttaactctgcagcgctgcgtgccgagcctgctgaaggctacaccacagcctctgcaatc
aatgccatcaaagaagccgctaaatctctgcctaaaggctactcagtgggctgggaaggc
ttgagctttgacgaagaacgccgtggcaatgaaaacatcattattttcatggtggtgctg
gtattcgtttacatggtgctggccgcacaatatgaaagcttcattattccgtttgcggtc
atgctgtcgttgccagttggtattttcggtagcttcctgttgctgaaaatggccgggttg
gccaatgacgtgtatgcgcagattggcttgatcatgctggtgggcttgcttggtaagaac
gcagtgctgattgtagagtttgcggtacaagcgcgtgaaaaaggtgcctctatcaaagaa
gccgccatcgccggggcaaaagcacgtttcagaccaatcctgatgacctcgtttgccttt
attgccggcctgattccattgacggtcgcgaccggggccggtgcgattggtaaccggacc
atcggtacctcggccttgggcggcatgttattcgggacgctctttggtgtggtcgtgatt
cctggcctttactatatattcgccagcttggcggacggtaaaacgctgatccgcaaggaa
gatcagaacccactgactgagtcctacgagtacaacagacatgaagaagaagacgaacat
gaccactaa
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