Methylobacterium currus: DA075_23550
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Entry
DA075_23550 CDS
T05184
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mee
Methylobacterium currus
Pathway
mee03030
DNA replication
mee03410
Base excision repair
mee03420
Nucleotide excision repair
mee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DA075_23550
03410 Base excision repair
DA075_23550
03420 Nucleotide excision repair
DA075_23550
03430 Mismatch repair
DA075_23550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mee03032
]
DA075_23550
03400 DNA repair and recombination proteins [BR:
mee03400
]
DA075_23550
Enzymes [BR:
mee01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DA075_23550
DNA replication proteins [BR:
mee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DA075_23550
DNA repair and recombination proteins [BR:
mee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DA075_23550
NER (nucleotide excision repair)
GGR (global genome repair) factors
DA075_23550
MMR (mismatch excision repair)
DNA ligase
DA075_23550
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DA075_23550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Ferritin_C144_05
Motif
Other DBs
NCBI-ProteinID:
AWB23502
UniProt:
A0A2R4WPM9
LinkDB
All DBs
Position
1:complement(5101934..5104414)
Genome browser
AA seq
826 aa
AA seq
DB search
MPPNRDPAFDDLEQKSAQSLHAALSAEIAEHDRRYHGEDAPTISDAEYDALRRKLESIEA
RFPDLAGTGEASASVGAKASDKFAKVRHAVPMLSLGNAFSDEEIGDFVERVRRFLGLPAA
EPVAFTAEPKIDGLSLSLRYEGGRLVTAATRGDGEVGEDVTANVRTIREIPEVLAGDDWP
AVCEVRGEVYLSHADFAGINARQEEAGKPLFANPRNAAAGSLRQLDPSITASRPLRFFAY
AAGEMSEQPAESQFEMLEAFQAWGLPVNPLTVLCADAAAMLAHYRMIEARRADLGYDIDG
VVYKVDSFALQRRLGFVARAPRWALAHKFPAQRATTVVEAIDINVGRTGSLNPLARLRPV
TVGGVVVSNATLHNEDYVHGVDADGNPIRSGIPVWQGQILRDDVDLAQGSDVRVGDTVVV
LRAGDVIPKVADVVLERRPKDAVPYRFPETCPACGSHAVRGLNPRTRKLDAVRRCTGGLI
CPAQAQERLKHFVSRNAFDIEGFGETYIETLFEAGLVHQPADLFRLDFEPLKAAVVARRQ
ALSAERALAAGKEVKKAAKKKDDEDKAIKNLLAGVEARRKISLNRLIFALGIEQVGEATA
KALAKHFSDMPALMAGVAAAASCQPGPDWIALASLNRVGATTRDRLLAAAAEAPDADLLA
GGAVARLSAPQREALVEAYGDSAGVRAAVERAAAQVPGDAYRALADDGEIGAVTTASLIQ
FFSEEHNVAAVKALLDEVETERPAPVAQAAAFAGKTVVFTGTLEKMTRSEAKATAERLGA
KVSGSVSAKTDLVVAGPGAGSKLKDAEKHGVTVVSEDEWLAMVASA
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaaccgcgaccccgccttcgacgacctcgagcaaaagagcgcgcagagcctc
cacgccgccctctcggcggaaatcgcggagcacgaccggcgctatcacggcgaggatgcg
ccgacgatctcggatgccgagtacgatgccctgcgccggaaactcgaatcgatcgaggcg
cgcttccccgacctcgccggcaccggcgaggcctcggccagcgtcggcgcgaaggcgtcg
gacaagttcgccaaggtgcggcacgcggtgccgatgctctccctcggcaacgccttctcg
gacgaggagatcggcgacttcgtcgagcgggtgcgccgcttcctcggcctcccggccgcc
gaaccggtcgctttcacggccgagccgaagatcgacggcctgtcgctgtccctgcgctac
gagggcgggcgtctcgtcaccgcggcgacccggggcgacggcgaggtcggcgaggacgtg
accgccaacgtccgcaccatcagggagattcccgaggtgctggccggtgacgattggccg
gccgtgtgcgaggtgcgcggcgaggtctacctctcgcacgccgatttcgccgggatcaac
gcccgccaggaggaggccggcaagccgctcttcgccaatccccgcaacgccgccgccggg
tccctgcgccagctcgatcccagcatcaccgcctcgcgccccctgcgcttcttcgcctac
gcggccggcgagatgtccgaacagccggccgagtcccagttcgagatgttggaggccttc
caggcctggggcctgcccgtgaacccgctgacggtgctctgcgccgacgcggccgcgatg
ctggcccattaccggatgatcgaggcgcggcgcgccgatctcggctacgacatcgacggc
gtcgtctacaaggtcgactccttcgcgctccagcgccgccttggcttcgtggcgcgggcg
ccgcgctgggcgctcgcccacaagttcccggcccagcgcgccaccaccgtggtcgaggcg
atcgacatcaatgtcgggcgcaccggctcgctcaacccgctggcgcgcttgaggccggtc
acggtcggcggcgtcgtggtgtcgaacgcgacgctccacaacgaggattacgtccacggc
gtcgatgccgacggcaatccgatccgcagcggcatcccggtctggcaaggccagatcctc
cgcgacgacgtcgacctcgcgcaagggtccgacgtgcgcgtcggcgacaccgtggtggtc
ctgcgcgccggcgacgtgatcccgaaggtcgccgacgtggtgctggagcgccgcccgaag
gacgcggtgccctaccgcttccccgagacctgcccggcctgcggcagccacgcggtgcgg
ggcctcaacccgcgcacgcgcaagctcgacgcggtgcgccgctgcaccggcggcctgatc
tgcccggcgcaagcgcaggagcggctgaagcacttcgtgtcgcgcaacgccttcgacatc
gagggttttggcgagacctacatcgagaccctgttcgaagccggcctggtgcaccagccc
gccgacctcttccgcctcgacttcgagcccctgaaggccgccgtcgtggcgcggcgccag
gcgctctcggccgagcgggcgctcgccgccggcaaggaggtcaagaaggccgccaagaag
aaggacgacgaggacaaggcgatcaagaacctcctcgcaggagtcgaggcgcgccgaaaa
atttcgctcaaccggctcatcttcgcgctgggcatcgagcaggtcggcgaggccaccgcc
aaggccctggccaagcacttttcggatatgccggccctgatggcgggcgtcgcggcggcg
gcttcctgccagcccgggccggactggatcgcgctcgccagcctcaaccgcgtcggcgcc
accacccgcgaccggctcctcgccgccgcggccgaggcgccggatgccgatcttctggcc
ggcggcgcggtggcgcggctctccgccccgcagcgcgaggccctggtcgaggcctatggc
gattccgcgggcgtgcgggcggcggtggagcgggccgccgcccaggtgcccggcgacgcc
taccgggcgctcgccgatgacggcgagatcggcgccgtcaccaccgcctcgctgatccag
ttcttctccgaggagcacaatgtcgcggcggtgaaggccttgctcgacgaggtcgagacc
gagcggccggcaccggtggcgcaagccgcggccttcgccggcaagaccgtggtgttcacc
ggcacccttgagaagatgacccgcagcgaggccaaggcgacggccgagcggctcggcgcc
aaggtctcgggctcggtctcggccaagaccgacctcgtggtggcgggaccgggtgcgggc
agcaagctcaaggacgccgagaagcacggcgtgacggtggtctcggaggacgagtggctg
gcgatggtggcctccgcctga
DBGET
integrated database retrieval system