KEGG   Methylobacterium currus: DA075_23550
Entry
DA075_23550       CDS       T05184                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mee  Methylobacterium currus
Pathway
mee03030  DNA replication
mee03410  Base excision repair
mee03420  Nucleotide excision repair
mee03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mee00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DA075_23550
   03410 Base excision repair
    DA075_23550
   03420 Nucleotide excision repair
    DA075_23550
   03430 Mismatch repair
    DA075_23550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mee03032]
    DA075_23550
   03400 DNA repair and recombination proteins [BR:mee03400]
    DA075_23550
Enzymes [BR:mee01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DA075_23550
DNA replication proteins [BR:mee03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DA075_23550
DNA repair and recombination proteins [BR:mee03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DA075_23550
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DA075_23550
   MMR (mismatch excision repair)
    DNA ligase
     DA075_23550
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DA075_23550
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase BRCT HHH_2 DNA_ligase_ZBD PTCB-BRCT HHH_5 Ferritin_C144_05
Other DBs
NCBI-ProteinID: AWB23502
UniProt: A0A2R4WPM9
LinkDB
Position
1:complement(5101934..5104414)
AA seq 826 aa
MPPNRDPAFDDLEQKSAQSLHAALSAEIAEHDRRYHGEDAPTISDAEYDALRRKLESIEA
RFPDLAGTGEASASVGAKASDKFAKVRHAVPMLSLGNAFSDEEIGDFVERVRRFLGLPAA
EPVAFTAEPKIDGLSLSLRYEGGRLVTAATRGDGEVGEDVTANVRTIREIPEVLAGDDWP
AVCEVRGEVYLSHADFAGINARQEEAGKPLFANPRNAAAGSLRQLDPSITASRPLRFFAY
AAGEMSEQPAESQFEMLEAFQAWGLPVNPLTVLCADAAAMLAHYRMIEARRADLGYDIDG
VVYKVDSFALQRRLGFVARAPRWALAHKFPAQRATTVVEAIDINVGRTGSLNPLARLRPV
TVGGVVVSNATLHNEDYVHGVDADGNPIRSGIPVWQGQILRDDVDLAQGSDVRVGDTVVV
LRAGDVIPKVADVVLERRPKDAVPYRFPETCPACGSHAVRGLNPRTRKLDAVRRCTGGLI
CPAQAQERLKHFVSRNAFDIEGFGETYIETLFEAGLVHQPADLFRLDFEPLKAAVVARRQ
ALSAERALAAGKEVKKAAKKKDDEDKAIKNLLAGVEARRKISLNRLIFALGIEQVGEATA
KALAKHFSDMPALMAGVAAAASCQPGPDWIALASLNRVGATTRDRLLAAAAEAPDADLLA
GGAVARLSAPQREALVEAYGDSAGVRAAVERAAAQVPGDAYRALADDGEIGAVTTASLIQ
FFSEEHNVAAVKALLDEVETERPAPVAQAAAFAGKTVVFTGTLEKMTRSEAKATAERLGA
KVSGSVSAKTDLVVAGPGAGSKLKDAEKHGVTVVSEDEWLAMVASA
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgccccccaaccgcgaccccgccttcgacgacctcgagcaaaagagcgcgcagagcctc
cacgccgccctctcggcggaaatcgcggagcacgaccggcgctatcacggcgaggatgcg
ccgacgatctcggatgccgagtacgatgccctgcgccggaaactcgaatcgatcgaggcg
cgcttccccgacctcgccggcaccggcgaggcctcggccagcgtcggcgcgaaggcgtcg
gacaagttcgccaaggtgcggcacgcggtgccgatgctctccctcggcaacgccttctcg
gacgaggagatcggcgacttcgtcgagcgggtgcgccgcttcctcggcctcccggccgcc
gaaccggtcgctttcacggccgagccgaagatcgacggcctgtcgctgtccctgcgctac
gagggcgggcgtctcgtcaccgcggcgacccggggcgacggcgaggtcggcgaggacgtg
accgccaacgtccgcaccatcagggagattcccgaggtgctggccggtgacgattggccg
gccgtgtgcgaggtgcgcggcgaggtctacctctcgcacgccgatttcgccgggatcaac
gcccgccaggaggaggccggcaagccgctcttcgccaatccccgcaacgccgccgccggg
tccctgcgccagctcgatcccagcatcaccgcctcgcgccccctgcgcttcttcgcctac
gcggccggcgagatgtccgaacagccggccgagtcccagttcgagatgttggaggccttc
caggcctggggcctgcccgtgaacccgctgacggtgctctgcgccgacgcggccgcgatg
ctggcccattaccggatgatcgaggcgcggcgcgccgatctcggctacgacatcgacggc
gtcgtctacaaggtcgactccttcgcgctccagcgccgccttggcttcgtggcgcgggcg
ccgcgctgggcgctcgcccacaagttcccggcccagcgcgccaccaccgtggtcgaggcg
atcgacatcaatgtcgggcgcaccggctcgctcaacccgctggcgcgcttgaggccggtc
acggtcggcggcgtcgtggtgtcgaacgcgacgctccacaacgaggattacgtccacggc
gtcgatgccgacggcaatccgatccgcagcggcatcccggtctggcaaggccagatcctc
cgcgacgacgtcgacctcgcgcaagggtccgacgtgcgcgtcggcgacaccgtggtggtc
ctgcgcgccggcgacgtgatcccgaaggtcgccgacgtggtgctggagcgccgcccgaag
gacgcggtgccctaccgcttccccgagacctgcccggcctgcggcagccacgcggtgcgg
ggcctcaacccgcgcacgcgcaagctcgacgcggtgcgccgctgcaccggcggcctgatc
tgcccggcgcaagcgcaggagcggctgaagcacttcgtgtcgcgcaacgccttcgacatc
gagggttttggcgagacctacatcgagaccctgttcgaagccggcctggtgcaccagccc
gccgacctcttccgcctcgacttcgagcccctgaaggccgccgtcgtggcgcggcgccag
gcgctctcggccgagcgggcgctcgccgccggcaaggaggtcaagaaggccgccaagaag
aaggacgacgaggacaaggcgatcaagaacctcctcgcaggagtcgaggcgcgccgaaaa
atttcgctcaaccggctcatcttcgcgctgggcatcgagcaggtcggcgaggccaccgcc
aaggccctggccaagcacttttcggatatgccggccctgatggcgggcgtcgcggcggcg
gcttcctgccagcccgggccggactggatcgcgctcgccagcctcaaccgcgtcggcgcc
accacccgcgaccggctcctcgccgccgcggccgaggcgccggatgccgatcttctggcc
ggcggcgcggtggcgcggctctccgccccgcagcgcgaggccctggtcgaggcctatggc
gattccgcgggcgtgcgggcggcggtggagcgggccgccgcccaggtgcccggcgacgcc
taccgggcgctcgccgatgacggcgagatcggcgccgtcaccaccgcctcgctgatccag
ttcttctccgaggagcacaatgtcgcggcggtgaaggccttgctcgacgaggtcgagacc
gagcggccggcaccggtggcgcaagccgcggccttcgccggcaagaccgtggtgttcacc
ggcacccttgagaagatgacccgcagcgaggccaaggcgacggccgagcggctcggcgcc
aaggtctcgggctcggtctcggccaagaccgacctcgtggtggcgggaccgggtgcgggc
agcaagctcaaggacgccgagaagcacggcgtgacggtggtctcggaggacgagtggctg
gcgatggtggcctccgcctga

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