Methylomonas sp. EFPC3: PL263_08940
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Entry
PL263_08940 CDS
T10335
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
meec Methylomonas sp. EFPC3
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meec02000
]
PL263_08940
01504 Antimicrobial resistance genes [BR:
meec01504
]
PL263_08940
Transporters [BR:
meec02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PL263_08940
Antimicrobial resistance genes [BR:
meec01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
PL263_08940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF4407
Motif
Other DBs
NCBI-ProteinID:
WFP52138
LinkDB
All DBs
Position
2023857..2027039
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AA seq
1060 aa
AA seq
DB search
MDKFSHFFIDRPIFASVLSIVIVLVGGLALIGLPIAQYPEIAPPTVVVTANYPGANAKVV
AETVATPVEQEVNGVEDMLYMSSQSTNSGVMALTITFKPGTNLDKAQVLVQNRVALAEPK
LPEEVRRQGLSVKKRSPDLSLVVNLVSPDKRYDSVYMSNYALLQIRDTLARLPGVGDILL
FGARDYSMRLWLNPEKIAARNLTAAEVVNAVREQNVQVAAGVVGQQPSPTAAEYQYTVST
LGRLSDPEQFGEIVIKPGANGQVTKLKDVARIELGAKDYNSGLFLDGEDTVGLAIFQLPG
SNAIDTKKAVVEAMEKLKTRFPEGLDYVLVYDTVVFVQQSIDAVVKTLFEALGLVVLVVI
VFLQNWRAAVIPLLAVPVSLIGAFAVMAGLGLSLNTLSLFGLVLAIGIVVDDAIVVVENV
ERHIAEGMHAREATRLAMSEVVGPVVATALVLVAVFVPTAFITGVSGAFYKQFALTIAVS
TVISAFNSLTLSPALCALLLDRAHENKDAFTKLFDKLFGWFFVRFNRFFDRFSLGYSRLV
ARLIRMVAVVLVLYVGLNGLNFLAFEKVPTGFIPDQDQGYLILYAQLPDAASLARTKDVV
QQASKIVLDTEGVSHINAYAGWSILSGANQSNVATMFARLDSFDSRAQRPDLHASQVVKT
LNQRLAAIPNARIAVFTPPPIRGMSSVGGFKLQVQDRNNAGIDELQKVTGEMIEKGNQQP
GLVGLFTTFRAGVPQLFVDVDRTQVKSMNLPLKDVFDTLQIYLGSLYVNDFNIFGRTYQV
TAQADADFRMLPSDITQLKTKNLSGGMVPLGAVADVKEISGPDKITRYNMYTAAEINGST
LPGVSSGDAIEKMGRVLRDNLPPGFDFEWTELSLQQVLAGNVALLVFPLSVIFVFLALAA
QYESWALPFAVILIVPMCILSSMTGVWIGGMDNNIFTQIGFIVLVGLASKNAILIVEFAK
HRQESGLSRFDAAVEAARIRLRPILMTSFAFVMGVFPLVIAKGAGAESRHLLGTAVFSGM
IGVTIFGLLLTPVFFVAVQGLAAKLRRNTKVQQAGAESMP
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggataaattcagccacttttttatcgaccggccgatcttcgcctcggtactgtcgatt
gtgatcgtgctggtcgggggcctggcgctgatcggcctgccgattgcccaatatccggaa
atcgctccgcccaccgtcgttgtcaccgccaactaccccggcgccaacgccaaagtcgtc
gccgaaacggtggcaacgccggtcgaacaggaagtcaacggcgtcgaggacatgctgtac
atgtcgtcgcaatcgaccaatagcggcgtcatggccttgaccatcaccttcaaacccggc
accaatctggacaaggcccaagtgctggtgcaaaaccgggtggcactggccgaaccgaaa
ctgccggaagaagtacgccgccaaggcttgagcgtgaaaaaacgcagcccggacctgagc
ctggtggtgaatctggtatcgccggataaacgctacgacagcgtttacatgagcaactac
gccctattgcaaatccgcgatacgctggcccggctgcccggcgtcggcgatattctgttg
ttcggcgcccgcgactacagcatgcgcctgtggctgaacccggaaaaaatcgccgcccgc
aatctgaccgccgccgaggtggtcaatgccgtgcgcgaacaaaacgtgcaggtcgcggcc
ggcgtggtcggccagcaaccgtcgccgaccgccgccgaataccaatacacggtcagcacg
ctgggccgcttgagcgatccggagcagttcggcgaaatcgtgattaaacccggcgccaac
ggccaggtcaccaaactcaaggacgtagcgcggatcgaactcggcgccaaggactacaac
tccggcctgttcctggacggcgaagataccgtcggcctggcgatcttccaattgcccggc
tccaacgccatcgacaccaaaaaagccgtggttgaagcgatggaaaaactgaaaacccgc
ttcccggaaggcctggattacgtgctggtctacgacacggtggtgtttgtccagcaatcg
atcgacgccgtggtcaagaccctgttcgaagcgttgggcttggtggtgttggtggtgatc
gtcttcctgcaaaactggcgggcggcggtgattccgttgctggcggtgccggtgtcgctg
atcggcgcctttgccgtgatggccggcttgggtttgtcgctgaatactttgtcgttattc
ggcctggtactggcgatcggtatcgtggttgacgatgccatcgtcgtggtcgaaaacgtc
gaacgccatattgccgaaggcatgcacgcccgcgaagccacccggctggcaatgagcgaa
gtggtggggccggtcgtcgccacggccctggtactggtcgccgtatttgtaccaaccgcc
ttcatcaccggcgtctccggcgcgttttacaaacagtttgccttgaccattgccgtctcg
acggtgatctcggccttcaactcactgactttgagcccggccctgtgcgcgctattgctg
gaccgcgcccacgagaacaaggacgccttcaccaaactgttcgataagttattcggctgg
tttttcgtccgcttcaaccgcttcttcgaccgtttcagcctcggctattccagactggtg
gcgcgactgatccggatggtcgccgtggttctggttctgtacgtaggcttgaacggcctg
aattttctggccttcgaaaaagtgccgaccggcttcattccggaccaggaccagggctat
ctgatcctgtacgcgcaattgcccgacgccgcatcgctggcccgcaccaaggacgtggtg
caacaagccagtaaaatcgtgctggacaccgaaggcgtcagccatatcaacgcctacgcc
ggctggtcgattctgagcggtgccaaccaatcgaatgtcgcgaccatgtttgcccggctg
gactcgttcgacagccgcgctcagcgccccgatctgcatgcctcgcaagtcgtcaaaacc
ctgaaccagcgattggccgccatccccaacgcccgcatcgccgtgttcacgccaccgccg
atccgcggcatgagttcggtcggcggtttcaaattgcaggtgcaggatcgcaataacgcc
ggcatcgacgagttgcaaaaagtcaccggcgaaatgatcgaaaaaggcaaccagcaaccg
ggtttggtcggcttgttcaccaccttccgcgccggcgtgccgcagttgttcgtcgacgtc
gaccgcactcaggtcaaatcgatgaatctgccattgaaagacgtgttcgacaccttgcag
atttatctgggctcgttgtacgtcaacgatttcaacatcttcggccgcacctatcaggtc
acggcccaggctgatgccgacttccggatgctgcccagcgacatcacccagctcaaaacc
aaaaacctgagcggcggcatggtgccgttgggcgcggtcgccgacgtcaaggaaatcagc
ggtccggacaaaattacccgctacaacatgtacaccgccgccgaaatcaacggcagcacc
ctgcccggcgtcagctccggcgatgccatcgagaaaatgggccgggtattgcgcgacaac
ctgccgcccggtttcgacttcgaatggaccgagctcagcttgcagcaggtgctggccggc
aacgtggcgttgctggtgttcccgctcagcgtgatcttcgtcttcctggccctggccgcg
caatacgaaagctgggccttgccgttcgcggtgattctgatcgtgccgatgtgtattttg
tcgtcgatgaccggggtctggatcggcggcatggataacaacatctttacccaaatcggc
ttcatcgtcttggtaggcctggccagcaagaacgcgattctgatcgtcgaattcgccaaa
catcgccaggaatccggcttgagccgcttcgatgccgcagtcgaggcggcacggattcgg
ttgcgaccgattttgatgacctcgttcgcttttgtgatgggcgtgtttccgttggtgatc
gccaagggcgccggcgccgaatcccggcacttgctgggcacggcggtattcagcggcatg
atcggcgtgacgattttcggtttgctgctgacgccggtgtttttcgtcgcggtacaaggg
ctggccgccaaattgcgccgcaataccaaggtgcaacaggccggcgcggagtcaatgcca
tga
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