Methylomonas sp. EFPC1: JWZ98_01450
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Entry
JWZ98_01450 CDS
T10319
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWZ98_01450 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meep03400
]
JWZ98_01450 (nth)
Enzymes [BR:
meep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JWZ98_01450 (nth)
DNA repair and recombination proteins [BR:
meep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JWZ98_01450 (nth)
Prokaryotic type
JWZ98_01450 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ig_6
Motif
Other DBs
NCBI-ProteinID:
QSB03537
LinkDB
All DBs
Position
complement(320939..321574)
Genome browser
AA seq
211 aa
AA seq
DB search
MNNEKRLLIFLRLAEATPNPTTELNFTTPFELLVAVVLSAQATDKGVNKATAKLFPVANT
PQAILALGEDGLKEHIKTIGLFNSKAANVIKLCQTLLEQHGGEVPRQREALEALAGVGRK
TANVILNTAFGEPTIAVDTHIFRVANRIGLAPGKNVLEVERKLEKTVPKQYKKDAHHLLI
LHGRYICVARKPRCGACCIADVCEFKAKNLD
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaaaaacgcctactgatattcctgcgcttggccgaagccacgccgaatccg
accaccgaactgaatttcactaccccgttcgaattattggtggcggtggtgctgtcggca
caagcgaccgataagggcgtcaacaaggcgactgccaagttgtttcccgtggcgaataca
ccgcaggcgatcctggccttgggggaagatggtttgaaggagcacatcaaaaccatcggc
ttattcaacagcaaggcggcaaatgtcataaaactttgtcagactctactggaacagcat
ggcggagaagtgccgcgtcagcgggaagcactggaggcgctggccggggtgggccgcaaa
acggcgaatgtgattttaaacaccgcatttggggagccgaccatcgccgtagatacgcat
attttccgggtcgccaatcgcatcggcctggcgccgggcaaaaatgtcctggaagtggag
cgcaaattggaaaaaaccgtgcccaagcaatacaagaaagacgcgcaccatctgctgatt
ctacacggccgatatatttgtgtggccaggaagccgcgttgcggagcttgctgcatcgcc
gatgtctgtgaatttaaggcaaagaatttagactga
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