Methylomonas sp. EFPC1: JWZ98_21085
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Entry
JWZ98_21085 CDS
T10319
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
meep Methylomonas sp. EFPC1
Pathway
meep01501
beta-Lactam resistance
meep01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWZ98_21085
01503 Cationic antimicrobial peptide (CAMP) resistance
JWZ98_21085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meep02000
]
JWZ98_21085
01504 Antimicrobial resistance genes [BR:
meep01504
]
JWZ98_21085
Transporters [BR:
meep02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JWZ98_21085
Antimicrobial resistance genes [BR:
meep01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWZ98_21085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QSB01103
LinkDB
All DBs
Position
complement(4585820..4588882)
Genome browser
AA seq
1020 aa
AA seq
DB search
MSFASWSIRNPIPSILLFILLSLAGLRGLQQLSIQSLPDLDLPSVIVKLNQPGAAPAQLE
TEVARKVEDSIATLSGLKHIRTSITDGLVQINVEFILEKKLSDALIETKDAVDRVRSDLP
SSVLQPSISAVTVGGAPILTYAIASTKLDEEALSWQVDDNVSKVMLGVAGVGRFERLGGV
QREIQLEVDPVRLASLGVTATDVSRALKQAQQESSGGRGNVGLAEQSVRTLATVRQASEL
ATFPVPIANGGEVRLEQIATVRDTVAERTQLAALDGKPLIGFNIYRAKGFDETRIANDVE
QALARIREADPSLSFTLISGSVAYSQEQYEGSMMMLYEGALLAVLVVWWFLRDWRATLVS
ASALPLSILPTFAVMHWLGFSMNMLTMLALAIVVGILVDDAIVEIENIARHVRMGKGIRQ
AAAEAVDEIALAVIATTLTLVVVFMPTALMSGVSGLFFRQFGWTAVVAVLASLLVARLLT
PMLAAYLLTEGHHPASVDGRLMPIYLQAVQWTLRHRQATMLLSTLFFIGAGLLLPLIPAG
FVPPADRGYTTVQLELPPGSSINDASRIAEAARTVLQPLAGVEHIFTAVGSSQIVGGGVT
RPGEQRKGALTLTLSERGQRPHQTQIEQAVRTVLREVPGARFSIGIGGPGEKMSLILSSD
NAAALKASAQALERDLRTVGTLSSISSTASLERPEIAIRPDWQRAAELGVTAELIGETVR
IATSGDFDAQLAKLNLDNRQLAIRVRIADAARQDLQVLANLRVRAGDRLVPLSSVAELTL
ASGSAQVDRYDRRRYVTVNAELGGMSLGEALAAAKTLPAVVNMPSSVKLIRTGDAEIMAE
LASSFGMAMLTGLLCVFCVLVLLFKDFFQPLTILSAIPLSMGGAFVALLLTGGELNIPSM
IGLIMLMGIVTKNSILLVEYALLAMREHGLSRHEALLDACHKRARPIVMTTVAMIAGMLP
IALGWGADASFRQPMAVAVIGGLISSTLLSLLVVPVVFTYVDGARQSLVKPFFGSVSKGE
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcctcttggtcgattcgcaaccccattccatcgattttactgtttatcttg
ctgtcattggccggactacgcggcttgcagcagttgtcgatacagagcttgccggatctg
gatttacccagcgtcattgtcaaacttaatcaaccgggcgcggcgccggcacaactggaa
accgaagtggcgcgcaaagtcgaggattcgattgccacgctgtccgggttgaagcatatc
cgcacctcgattaccgatggcttggtgcaaatcaatgtcgaatttattctggaaaaaaag
ctttccgatgccttgatagaaaccaaggacgcggtggacagggtgcgctcggatttacct
agtagtgtgctgcaacccagtatcagtgcggtgacagtgggtggcgcgccgattttgacc
tatgcgattgcctcgaccaaactggacgaggaagccttatcctggcaggtggacgataat
gtcagcaaggtcatgttgggcgtagccggtgtcggccgtttcgaacggctgggcggtgtg
cagcgggaaatacagctggaagtcgatccggtgcgcttggcttcgctgggcgtcaccgcg
accgatgtgtcgcgagccttgaaacaggcgcagcaggagtcttccggcggccggggtaat
gtgggcttggcggagcaatcggtgcgcacactggccacggtgcggcaggccagcgaactg
gcgacctttccggtgcctatagccaacggcggcgaggtgcgcttggagcaaatcgccacg
gtccgcgacaccgttgccgagcgtacgcaattggcagccttggacggcaagcccttgatc
ggtttcaacatctacagggccaagggttttgacgaaacccgcatcgccaatgatgtggag
caggccttggcgcggatacgcgaagccgatccttccttgagttttacgctgatttccggt
tcggtggcgtattcgcaagagcagtatgaaggttcgatgatgatgctctacgagggcgcg
ttattggcggtgctggtggtctggtggttcttgcgcgattggcgggcaactttggtatcg
gcgtcggccctgcctttgtcgattctgccgacgttcgcggtgatgcattggttggggttt
tccatgaacatgctgaccatgctggccttggctatcgtggtcgggatattggtggacgat
gcgattgtggaaatcgaaaacatcgcccggcatgtgcggatgggcaaaggcatccgtcag
gccgccgccgaagcggttgatgaaatcgcgctagcggtgatcgccaccaccttgacattg
gtggtggtgtttatgcctactgccctgatgagcggggtgtcaggattgtttttccggcag
ttcggttggaccgccgtggtggcggtgctggcatccttgttggtggcgcgtctgctgacg
ccgatgctggcggcttatttactcaccgaaggccatcacccggccagcgtcgatggcaga
ttgatgcccatttacctgcaagccgtgcagtggaccttgcgtcatcgccaggcgacgatg
ctgctctctacgctgttttttatcggtgctggcttattgctgcccttgatcccggccggt
ttcgtaccacccgctgatcgcggctataccacggtgcaactcgagttgccgccgggcagt
tcgataaacgatgccagccgaatcgccgaagcggcgcgaactgttctgcaaccgctggca
ggtgtcgagcacatttttaccgcggtcggcagtagtcaaatagtcggtggcggcgtgacc
agaccgggcgaacaacggaagggggcgctgaccttaaccttgagcgagcggggacagcgg
ccgcatcaaacgcagattgaacaggcggtgcgaacggtattgcgcgaagtgcccggcgcc
cgcttttccattggcattggtggccctggcgagaaaatgtctttgatactgtccagcgat
aatgcggcggctttaaaagccagtgcgcaggcattggagcgcgatttgcgtaccgtgggt
accttaagcagcatcagctccaccgcgagcctggaacggccggaaattgcgattcggccg
gactggcagcgcgctgccgaactaggcgtgacagccgaactgatcggcgaaacggtgcgc
attgccaccagcggtgatttcgacgcccaactggccaagctgaacctggataaccgccaa
ctcgcgattcgggtaaggatagccgatgccgcgcggcaggatttgcaggtcttagccaat
ctaagagtaagggcgggggataggttggtgccgctgtccagtgtggcggagctaacgtta
gccagcggttcggcgcaggtggataggtatgaccgtcgccgctatgtcacggtcaacgcc
gaactgggcggcatgtccctgggtgaggcactggccgctgccaaaactttgccggcagtg
gttaatatgccgtccagcgttaaattgattcgtaccggcgacgccgaaatcatggccgaa
ttggccagcagttttggtatggcgatgctgaccggattgctgtgcgtgttttgcgtattg
gtgttgctattcaaggatttctttcaacccttgaccatcctgtcggcgatacccttgtca
atgggcggcgcgtttgtcgcactgttgctgaccggcggtgagttgaatattccgtcgatg
ataggcttgatcatgctgatgggcatcgtcaccaaaaactcgatcctgctggtggaatat
gcgttgctggcgatgcgcgaacatgggctgagtcggcacgaggccttgctggatgcctgc
cataaacgcgcccggcctatagtcatgaccacggtggccatgattgccggtatgttgccg
attgcgttgggatggggggcggacgccagttttcgtcagccgatggcggtggcggtgatt
ggcggcttgattagctctactttgttaagtctgctggtggtgccggtggtgtttacctat
gtcgatggtgctcggcaaagtttggtaaagccgtttttcggtagtgtctcaaagggcgaa
tga
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