Methanochimaera problematica: F1737_00610
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Entry
F1737_00610 CDS
T09667
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K16792
methanogen homoaconitase large subunit [EC:
4.2.1.114
]
Organism
mefw
Methanochimaera problematica
Pathway
mefw00300
Lysine biosynthesis
mefw00680
Methane metabolism
mefw01100
Metabolic pathways
mefw01110
Biosynthesis of secondary metabolites
mefw01120
Microbial metabolism in diverse environments
mefw01210
2-Oxocarboxylic acid metabolism
mefw01230
Biosynthesis of amino acids
mefw01240
Biosynthesis of cofactors
Module
mefw_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
F1737_00610
09105 Amino acid metabolism
00300 Lysine biosynthesis
F1737_00610
Enzymes [BR:
mefw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
F1737_00610
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Paralog
GFIT
Motif
Pfam:
Aconitase
AcnX_3rd
Motif
Other DBs
NCBI-ProteinID:
WOF15284
UniProt:
A0AA97I346
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All DBs
Position
complement(126562..127776)
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AA seq
404 aa
AA seq
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MSTLSEIILKGGAGSFVDCKVDRAFAHDGTGIQALVALRGLGDVKPACPEKVSVIYDHIA
PANNTTTANLQHELREFSKQAGFCFHDIGDGICHQIMSEGVCLPGEVVVGADSHSCTLGA
FGAFATGVGASDMAAIWASGETWFKVPETIEINLDGDFRQFCEPKDLALTYVKKLGMDGA
TYKALEFTGEGAVNVPMDGRLTLCNMAIETGAKTGLFYPDAVTKEYLAGFGHSIKTAKPE
ECSYEKTVDIDIGDLEPVLAVPHRVDTVEPVTRYSGTPLDQVFLGTCTNGRYEDLKRFAD
IVRGRKVSVRTIVVPASRAVLMQALKTGVLSDIIDAGCSIGTPGCGPCLGAHMGVLGEGE
VGLSTANRNFKNRMGVGAEYYLCSPSTAAASAVRGEITSPEEFA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctttcagagattattctaaagggaggtgcaggaagctttgttgactgcaaa
gttgacagggcatttgcacatgacggcacgggaattcaggcactggttgcattaaggggg
cttggtgatgtgaaaccggcatgccctgaaaaagtttcggtgatatatgaccacattgca
cctgcaaacaacaccacaaccgcaaatctccagcacgagctcagggaattttcaaaacag
gcaggattctgttttcatgacatcggagacggcatctgccaccagataatgagcgaaggg
gtgtgccttccgggcgaggtcgttgtcggtgcagactcacactcatgcacacttggtgca
ttcggggcgtttgcaaccggcgtcggggcatcggatatggctgccatctgggcatcgggc
gaaacctggtttaaagttcctgaaacgattgaaattaatctggacggagatttcaggcag
ttttgtgagccaaaggaccttgcccttacttatgtcaaaaaactagggatggacggtgcg
acatacaaggcacttgagtttacaggcgaaggggcagtgaatgtaccgatggacggcaga
cttactctttgcaacatggcaattgagaccggggcaaagacaggccttttttatcccgac
gccgttacaaaggaatatcttgcaggattcgggcacagcattaagacagcaaagccggaa
gagtgcagttatgaaaaaacagtcgatattgatatcggagatctcgagcctgttctggca
gtgccgcacagggtggatacggtcgagcctgtaacccgttattcggggacacctcttgat
caggtcttccttggcacctgcacaaacggaagatatgaggatcttaaaaggtttgcagat
attgtcaggggaaggaaagtgtctgttagaacaattgttgtcccggcatcaagagctgtt
ttaatgcaggcactaaagacaggagtcctctctgacataatcgatgcaggatgctcaatc
ggaacaccgggctgcggaccatgtcttggtgcccatatgggtgtccttggagaaggagag
gtaggtctctcaacagcaaacagaaacttcaaaaacagaatgggagtgggggccgaatat
tacctctgttcgccttcaaccgctgccgcaagtgcggttcgcggagagattacatcaccg
gaggagtttgcatga
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