Methanosphaera sp. ISO3-F5: PXD04_07165
Help
Entry
PXD04_07165 CDS
T09686
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
meis
Methanosphaera sp. ISO3-F5
Pathway
meis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PXD04_07165 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meis03400
]
PXD04_07165 (nth)
Enzymes [BR:
meis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PXD04_07165 (nth)
DNA repair and recombination proteins [BR:
meis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PXD04_07165 (nth)
Prokaryotic type
PXD04_07165 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
DUF2400
Motif
Other DBs
NCBI-ProteinID:
WQH63484
LinkDB
All DBs
Position
777530..778183
Genome browser
AA seq
217 aa
AA seq
DB search
MDENMKGNFSTDEIKFIVDELESIFERRTFEDQTPYQVLIRTILSQRTRDENTDKATESL
FKVYPTMEEVAEAPVEEIAQLVRQAGFYNVKAARIKEVSNILLDEYGGIVPDNIKELMKL
PGVGRKTANCVLVFGFQKDAIPVDVHVHRISNRLGLVHTKEPEETEDVLREIVPQEYWLP
INDLMVQFGQNICKPINPQHMECPFTDLCELYNTELE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaatatgaaaggaaacttctcaacagatgaaataaaattcatagttgacgaa
ctagaatcaatatttgaaagaagaacattcgaagaccaaacaccttaccaggtacttata
agaacaatactatcccaacgaacaagggacgaaaacactgacaaagcaacagaaagccta
tttaaggtatatcccacgatggaagaagtagcagaagcaccagtagaagaaatagcacaa
ctagtacgacaggcaggattctataatgtgaaagcagcaagaataaaagaagtgtcaaac
atactactcgatgaatatgggggaatcgttccggataatattaaggaactaatgaaatta
cctggtgttggcagaaaaactgcaaactgcgtactagtatttggcttccaaaaggatgca
atacctgtagatgtgcatgttcacaggatatccaaccgtttaggacttgttcatacaaaa
gaacccgaggaaaccgaagatgttctacgtgaaatagtgccccaggagtactggttaccc
attaatgatttaatggttcagtttggtcaaaacatatgtaaaccaatcaacccacaacac
atggaatgcccattcacagacttatgtgaattatacaatacagaacttgaataa
DBGET
integrated database retrieval system
