KEGG   Methylomarinovum tepidoasis: MIN45_P0798
Entry
MIN45_P0798       CDS       T09124                                 
Name
(GenBank) DNA ligase (NAD+)
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
meiy  Methylomarinovum tepidoasis
Pathway
meiy03030  DNA replication
meiy03410  Base excision repair
meiy03420  Nucleotide excision repair
meiy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:meiy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MIN45_P0798
   03410 Base excision repair
    MIN45_P0798
   03420 Nucleotide excision repair
    MIN45_P0798
   03430 Mismatch repair
    MIN45_P0798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meiy03032]
    MIN45_P0798
   03400 DNA repair and recombination proteins [BR:meiy03400]
    MIN45_P0798
Enzymes [BR:meiy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     MIN45_P0798
DNA replication proteins [BR:meiy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MIN45_P0798
DNA repair and recombination proteins [BR:meiy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     MIN45_P0798
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MIN45_P0798
   MMR (mismatch excision repair)
    DNA ligase
     MIN45_P0798
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MIN45_P0798
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD HHH PTCB-BRCT HHH_3 Fur_reg_FbpA Zn_ribbon_NUD BRCT_2 RUBY_RBDX
Other DBs
NCBI-ProteinID: BCX88429
UniProt: A0AAU9C5I8
LinkDB
Position
complement(831211..833229)
AA seq 672 aa
MAVPEEIRRRVEQLRREIEYHNYRYYVLDEPVISDAEYDALMAQLRRLEEQYPELITPDS
PTQRIGAPPSEAFAPVRHEVPMLSLDNAFSDEDVIDFDRRVRERLGVEQVLYSCEPKLDG
LAVSILYEHGSLTRAATRGDGYTGEDVTANVRTIRSVPLRLRGSGWPERFEVRGEVFMPI
EGFKKLNEWALKHGEKVFANPRNAAAGSLRQLNPRITARRPLDFFAYGYGLFPEDRLPKT
HHELLDRFQDWGVPVAPEREVVEAVTGCLDYYRRLLARRESLPYEADGVVYKVDRFDWQR
LLGYTARAPRWAIAHKFPAHEATTVVEAIEVQVGRTGVLTPVAKLKPVQVGGVTVSSASL
HNFEEVKRKDVRVGDTVLVRRAGEVIPEVVKVILEKRPPDAKPVRPPTHCPVCGAEVVAD
PGGVILRCSGGLYCPAQLKASIKHFASREAMDIEGLGEKLIDQLVDKGLVRDVADLYDLT
FEQLIQLERMGPKSAQNLLEAIERSKHTTLPRFLYALGIREVGEVTAQLLAEHFGLLERI
MNAGEEELAQIPGIGPVVAHHIVTFFRQPHNREVIERLRRAGVHWEEGAPAEKPKPLAGK
TFVFTGTLAAMTREEAKRRVEALGAKVSNSVSKKTDYLVMGENPGSKLDKARRLGVEILD
ENAFLDLLKRYS
NT seq 2019 nt   +upstreamnt  +downstreamnt
gtggccgttccggaggagatccgcaggcgggtcgaacagctgcgccgcgaaatcgaatac
cacaactaccgttattacgtcctcgacgaaccggtcatctccgacgccgaatacgacgcc
ctgatggcgcagctccggcgtctggaggaacagtatcccgagctgatcacccccgactcc
cccacccagcgcatcggcgccccgccctcggaagccttcgccccggtgcgccacgaagtg
ccgatgctgtcgctggacaacgctttcagcgacgaggacgtcatcgacttcgaccgccgg
gtgcgcgagcgtctgggggtggaacaggtcctctattcctgcgagcccaagctcgacggc
ctggccgtgtccatcctctacgagcacggtagcctgacccgggccgccacccgcggcgac
ggctacaccggcgaggatgtgaccgccaacgtccgcaccatccgctccgtcccgctgcgc
ctgcgcggcagtggctggccggagcgcttcgaggtccgcggcgaggtgttcatgcccata
gagggcttcaagaagctcaacgaatgggccctgaagcacggggaaaaggtcttcgccaat
ccccgcaatgccgctgccggcagcctgcgccagctcaatcccaggatcaccgcccgccgc
cccctggactttttcgcctacggctacggcctctttcccgaagatcggttgcctaagacc
catcacgaactgctggaccgcttccaggactggggcgtgccggtcgcgcccgaacgcgag
gtggtcgaagcggtgacgggctgtctcgactactaccgccgcctgcttgccaggcgcgag
tcgctcccctacgaggccgacggcgtggtctacaaggtggaccgtttcgactggcagcgc
ctgctcggctacaccgcccgcgccccacgttgggccatcgcccacaagttccccgcccat
gaggccaccacggtagtggaggccatcgaggtccaggtgggacgcaccggggtgctgacc
ccggtcgccaagctcaaacccgtacaggtgggcggggtgacggtatcgagcgcctcgctg
cacaatttcgaggaggtcaaacgcaaggacgttcgcgtcggcgacacggtcctggtgcgc
cgcgccggcgaggtgattccggaagtggtcaaggtcatcctggagaaacggccgccggat
gccaaaccggtgcgtccccccacccactgcccggtatgcggtgccgaggtggtcgccgat
cctggcggcgtcatcctgcgctgcagcggcgggctttactgccccgcccagctcaaggcc
tcgatcaagcacttcgcctcccgcgaagcgatggacatcgaggggctgggggagaaactc
atcgatcagctggtggacaaggggctggtcagggacgtcgccgacctttacgacctgacc
ttcgagcaactgatccagctggaacggatggggccgaaatcggcgcagaacctgctggaa
gccatcgaacgcagcaagcacaccaccctgccccgctttctctatgccttggggatccgc
gaagtgggggaagtgaccgcccagctgcttgccgagcatttcggactcctggaacggatc
atgaacgccggcgaagaggagctggcacagattcccggcatcggcccggtcgttgcccac
cacatcgtcaccttcttccgtcagccccacaaccgtgaagtcatcgaacgcttgcgccgc
gccggcgtccattgggaagaaggggcaccggcggaaaaacccaaacctttggcggggaaa
accttcgtcttcaccggcaccctcgccgccatgacccgtgaggaagccaaacgccgggtc
gaggcccttggcgccaaggtgagcaattccgtatcgaagaagaccgattatctggtgatg
ggggaaaatcccggctccaagctggacaaggcccgccggctgggggtggaaatcctcgac
gaaaacgcgtttctcgacttgctgaaaaggtattcctga

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