Methylomarinovum tepidoasis: MIN45_P0798
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Entry
MIN45_P0798 CDS
T09124
Name
(GenBank) DNA ligase (NAD+)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
meiy
Methylomarinovum tepidoasis
Pathway
meiy03030
DNA replication
meiy03410
Base excision repair
meiy03420
Nucleotide excision repair
meiy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MIN45_P0798
03410 Base excision repair
MIN45_P0798
03420 Nucleotide excision repair
MIN45_P0798
03430 Mismatch repair
MIN45_P0798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meiy03032
]
MIN45_P0798
03400 DNA repair and recombination proteins [BR:
meiy03400
]
MIN45_P0798
Enzymes [BR:
meiy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MIN45_P0798
DNA replication proteins [BR:
meiy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MIN45_P0798
DNA repair and recombination proteins [BR:
meiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MIN45_P0798
NER (nucleotide excision repair)
GGR (global genome repair) factors
MIN45_P0798
MMR (mismatch excision repair)
DNA ligase
MIN45_P0798
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MIN45_P0798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
HHH
PTCB-BRCT
HHH_3
Fur_reg_FbpA
Zn_ribbon_NUD
BRCT_2
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
BCX88429
UniProt:
A0AAU9C5I8
LinkDB
All DBs
Position
complement(831211..833229)
Genome browser
AA seq
672 aa
AA seq
DB search
MAVPEEIRRRVEQLRREIEYHNYRYYVLDEPVISDAEYDALMAQLRRLEEQYPELITPDS
PTQRIGAPPSEAFAPVRHEVPMLSLDNAFSDEDVIDFDRRVRERLGVEQVLYSCEPKLDG
LAVSILYEHGSLTRAATRGDGYTGEDVTANVRTIRSVPLRLRGSGWPERFEVRGEVFMPI
EGFKKLNEWALKHGEKVFANPRNAAAGSLRQLNPRITARRPLDFFAYGYGLFPEDRLPKT
HHELLDRFQDWGVPVAPEREVVEAVTGCLDYYRRLLARRESLPYEADGVVYKVDRFDWQR
LLGYTARAPRWAIAHKFPAHEATTVVEAIEVQVGRTGVLTPVAKLKPVQVGGVTVSSASL
HNFEEVKRKDVRVGDTVLVRRAGEVIPEVVKVILEKRPPDAKPVRPPTHCPVCGAEVVAD
PGGVILRCSGGLYCPAQLKASIKHFASREAMDIEGLGEKLIDQLVDKGLVRDVADLYDLT
FEQLIQLERMGPKSAQNLLEAIERSKHTTLPRFLYALGIREVGEVTAQLLAEHFGLLERI
MNAGEEELAQIPGIGPVVAHHIVTFFRQPHNREVIERLRRAGVHWEEGAPAEKPKPLAGK
TFVFTGTLAAMTREEAKRRVEALGAKVSNSVSKKTDYLVMGENPGSKLDKARRLGVEILD
ENAFLDLLKRYS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtggccgttccggaggagatccgcaggcgggtcgaacagctgcgccgcgaaatcgaatac
cacaactaccgttattacgtcctcgacgaaccggtcatctccgacgccgaatacgacgcc
ctgatggcgcagctccggcgtctggaggaacagtatcccgagctgatcacccccgactcc
cccacccagcgcatcggcgccccgccctcggaagccttcgccccggtgcgccacgaagtg
ccgatgctgtcgctggacaacgctttcagcgacgaggacgtcatcgacttcgaccgccgg
gtgcgcgagcgtctgggggtggaacaggtcctctattcctgcgagcccaagctcgacggc
ctggccgtgtccatcctctacgagcacggtagcctgacccgggccgccacccgcggcgac
ggctacaccggcgaggatgtgaccgccaacgtccgcaccatccgctccgtcccgctgcgc
ctgcgcggcagtggctggccggagcgcttcgaggtccgcggcgaggtgttcatgcccata
gagggcttcaagaagctcaacgaatgggccctgaagcacggggaaaaggtcttcgccaat
ccccgcaatgccgctgccggcagcctgcgccagctcaatcccaggatcaccgcccgccgc
cccctggactttttcgcctacggctacggcctctttcccgaagatcggttgcctaagacc
catcacgaactgctggaccgcttccaggactggggcgtgccggtcgcgcccgaacgcgag
gtggtcgaagcggtgacgggctgtctcgactactaccgccgcctgcttgccaggcgcgag
tcgctcccctacgaggccgacggcgtggtctacaaggtggaccgtttcgactggcagcgc
ctgctcggctacaccgcccgcgccccacgttgggccatcgcccacaagttccccgcccat
gaggccaccacggtagtggaggccatcgaggtccaggtgggacgcaccggggtgctgacc
ccggtcgccaagctcaaacccgtacaggtgggcggggtgacggtatcgagcgcctcgctg
cacaatttcgaggaggtcaaacgcaaggacgttcgcgtcggcgacacggtcctggtgcgc
cgcgccggcgaggtgattccggaagtggtcaaggtcatcctggagaaacggccgccggat
gccaaaccggtgcgtccccccacccactgcccggtatgcggtgccgaggtggtcgccgat
cctggcggcgtcatcctgcgctgcagcggcgggctttactgccccgcccagctcaaggcc
tcgatcaagcacttcgcctcccgcgaagcgatggacatcgaggggctgggggagaaactc
atcgatcagctggtggacaaggggctggtcagggacgtcgccgacctttacgacctgacc
ttcgagcaactgatccagctggaacggatggggccgaaatcggcgcagaacctgctggaa
gccatcgaacgcagcaagcacaccaccctgccccgctttctctatgccttggggatccgc
gaagtgggggaagtgaccgcccagctgcttgccgagcatttcggactcctggaacggatc
atgaacgccggcgaagaggagctggcacagattcccggcatcggcccggtcgttgcccac
cacatcgtcaccttcttccgtcagccccacaaccgtgaagtcatcgaacgcttgcgccgc
gccggcgtccattgggaagaaggggcaccggcggaaaaacccaaacctttggcggggaaa
accttcgtcttcaccggcaccctcgccgccatgacccgtgaggaagccaaacgccgggtc
gaggcccttggcgccaaggtgagcaattccgtatcgaagaagaccgattatctggtgatg
ggggaaaatcccggctccaagctggacaaggcccgccggctgggggtggaaatcctcgac
gaaaacgcgtttctcgacttgctgaaaaggtattcctga
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