KEGG   Pulveribacter suum: C7H73_09300
Entry
C7H73_09300       CDS       T05362                                 
Symbol
ligA
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
melm  Pulveribacter suum
Pathway
melm03030  DNA replication
melm03410  Base excision repair
melm03420  Nucleotide excision repair
melm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:melm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C7H73_09300 (ligA)
   03410 Base excision repair
    C7H73_09300 (ligA)
   03420 Nucleotide excision repair
    C7H73_09300 (ligA)
   03430 Mismatch repair
    C7H73_09300 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:melm03032]
    C7H73_09300 (ligA)
   03400 DNA repair and recombination proteins [BR:melm03400]
    C7H73_09300 (ligA)
Enzymes [BR:melm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     C7H73_09300 (ligA)
DNA replication proteins [BR:melm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C7H73_09300 (ligA)
DNA repair and recombination proteins [BR:melm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     C7H73_09300 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C7H73_09300 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     C7H73_09300 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C7H73_09300 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD HHH PTCB-BRCT Nlig-Ia YiiM_3-alpha 5_3_exonuc DUF4796_N
Other DBs
NCBI-ProteinID: AVP57831
UniProt: A0A2P1NLA7
LinkDB
Position
2012964..2015144
AA seq 726 aa
MTGNIELFSASAPKGQALAASKIIALREQLNRWAHEYYVQDAPSVPDAEYDRAFQQLQAL
EGAYPELATPDSPTQRVIGAVMQGLAPVRHRVPMLSIRTETDTEGSGAETFDARVRRELK
LAPEAPPVQYVAEPKFDGLAMNLRYEDGRLVQAATRGDGEVGEDVTHNIRTIRQIPLSLP
ADVPPVLEVRGEVYMRRADFERLNERQRERGDKTFVNPRNAAAGAVRQLDSGIAAQRPLS
FFAYGLGEVTPADEGGPRFASHHQVLQQLKGWGFPVSELVSQAQGAPELIAYHQRVGALR
DALPFDIDGVVYKVDSLALQRELGFVTREPRWAVAHKYPAQEMVTRVEGIDIQVGRTGKL
TPVARLAPVFVGGVTVTNATLHNLFEIRKKGVRVGDQVIVRRAGDVIPEVVGTVPAALSP
VAQALAGSDLLADAAAGSEGAARAAPRVPYVPNFRMPRQCPVCASAVVREKGEANHRCTG
GIFCPAQAKQALLHFAQRRAMDIEGLGEKLVDQLVEGRIIRALPDLYRLGLSTLAALDRM
ADKSAQNLLAALEQSKRTTLARFLFALGVRHVGEATAKELARHFGTLDAVMGATPEQLLQ
VPDVGPIVADAIHAFFAEPHNREVVEQLRACGVTWEEGAPQGGAAVLPLAGQTVVLTGTL
PTLSREQAQALLEAAGAKVAGSVSKKTSYVVAGEDAGSKLAKAQQLGIAVLDEAGLHALL
AGRPGA
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgactggaaatatagagcttttttcggcctcagcgcccaaggggcaagcgttggcagct
agcaaaatcatagcgctgcgcgagcagctgaaccgctgggcgcatgagtactacgtgcag
gacgcgcccagcgtgcccgatgccgagtacgaccgggccttccagcagttgcaggcgctg
gagggcgcctatccggagctggccacgcccgactcgcccacccagcgcgtgatcggcgcg
gtgatgcagggcctggcgcccgtgcgccaccgcgtgcccatgctcagcattcgcaccgag
accgacaccgagggcagcggcgccgagaccttcgacgcccgcgtgcggcgcgaactgaag
ctcgcccccgaggcgccgccggtgcaatacgtggccgagcccaagttcgacggcctggcc
atgaacctgcgctacgaggacggccgcctggtgcaggccgccacgcgcggcgacggcgag
gtgggcgaggacgtgacgcacaacatccgcaccatccgccagatccctttgagcctgccc
gccgacgtgccgccggtgctggaggtgcgcggcgaggtctatatgcgccgggccgacttc
gagcggctgaacgagcgccagcgcgagcgcggcgacaagaccttcgtcaacccgcgcaac
gccgcggccggcgccgtgcgccagcttgactcgggcatcgccgcgcagcgaccgctgtcg
ttctttgcctatggcctgggcgaagtcacgccggcagacgagggcgggccccggttcgcc
tcgcaccaccaggtgctgcagcaactgaaaggctggggctttccggtctcggagctggtc
agccaggcacagggcgctcctgaactcatcgcgtaccaccagcgcgttggcgccctgcgc
gacgcgctgccctttgacatcgacggcgtggtctacaaggtggacagcctggcgctgcag
cgcgagctgggcttcgtcacgcgcgagccgcgctgggccgtggcgcacaagtacccggcg
caggagatggtcacgcgcgtggagggcatcgacatccaggtcgggcgcaccggcaagctg
acgcccgtggcgcggctggcgccggtcttcgtgggcggcgtcaccgtcaccaacgccacg
ctgcacaacctgttcgagattcgcaagaagggcgtgcgcgtgggcgaccaggtcatcgtg
cgccgcgccggcgacgtgatccccgaggtggtgggcacggtgccggccgcgctgtcgccc
gtggcccaggccctggccggctcggatttgctggccgatgcagccgccggcagcgagggc
gccgcgcgcgccgcgccgcgcgtgccctacgtgcccaacttccgcatgccgcgccagtgc
ccggtgtgcgccagcgccgtggtgcgcgaaaagggcgaggccaaccaccgctgcacgggc
ggcatcttctgcccggcccaggccaagcaggcgctgctgcacttcgcccagcgccgcgcc
atggacatcgaaggcctgggcgagaagctggtggaccagctggtggagggccgcatcatc
cgcgcgctgcccgacctgtaccggctgggcctgtccaccctggcggcgctcgaccgcatg
gcggacaagtcggcgcagaacctgctggcggcgctggagcagtccaagcgcaccacgctg
gcgcgctttttgttcgccttgggagtacgccacgtgggcgaggccacggccaaggagctg
gcgcgccacttcggcacgctggacgccgtcatgggcgccacgcccgagcagctgctgcag
gtgcccgacgtgggccccatcgtggccgacgccatccacgctttctttgccgagccgcac
aaccgcgaggtggtcgagcagctgcgcgcctgcggggtgacctgggaggagggcgcgccg
cagggcggcgccgccgtgctgccgctggccggccaaacggtggtgctgaccggcaccctg
ccgacgctcagccgcgagcaggcccaggccctgctggaggcggccggcgccaaggtggcc
ggctcggtcagcaagaagacgagttacgtcgttgccggcgaggacgcgggcagcaagctc
gccaaggcgcagcagctgggcatcgcggtgctggacgaagccggcctgcacgcgctgctg
gccggccgcccgggcgcctga

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