Candidatus Methanoliparum sp. LAM-1: MTLP_08630
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Entry
MTLP_08630 CDS
T07692
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
melu
Candidatus Methanoliparum sp. LAM-1
Pathway
melu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
melu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTLP_08630 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
melu03400
]
MTLP_08630 (nth)
Enzymes [BR:
melu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MTLP_08630 (nth)
DNA repair and recombination proteins [BR:
melu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTLP_08630 (nth)
Prokaryotic type
MTLP_08630 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
DUF6042
DnaB
Baculo_LEF-11
DUF2400
Motif
Other DBs
NCBI-ProteinID:
BDC36181
LinkDB
All DBs
Position
795547..796188
Genome browser
AA seq
213 aa
AA seq
DB search
MSDNIKIMEILKKEYKNRLTTLEDSSFKDPFQILISCILSLRTRDKTTDEASKRLFSIVK
RPEDVLKLTREEIEKIIHPVGFYRKKADTIYEISLQLVKEYNSSVPDTIDELLKFKGVGR
KTANIVITHAYHKPGIAVDTHVHRISNRLGLVSTKNPDETEFALRNVIPKEYWISLNSLF
VVHGQTICTPLSPKCSKCIIKEYCKRVNVKRSR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatattaaaattatggagatcttaaaaaaagagtacaagaacagattaact
acgttagaagattcgtcttttaaagacccgttccagatccttatctcttgtatcttaagc
ttgagaaccagggacaaaacaaccgatgaagcatctaagagattattttctattgtaaaa
agacctgaagatgtattaaaattaaccagagaagagatagaaaaaatcatacaccccgtt
ggattttatagaaagaaggcagatactatctatgagatcagtctccagcttgtaaaagaa
tacaattcatctgttcctgatacgatagatgaattgttaaaattcaaaggtgttggtaga
aagactgcaaacatcgttataacacatgcataccacaaaccgggtatagcagtcgatact
catgttcatagaatatccaacaggctagggcttgtatctactaaaaatccagacgagacg
gagtttgcgttaagaaacgtgattcctaaagaatattggatctctttgaatagcttattt
gtagttcatggccagactatttgtacgccgttaagcccaaaatgcagcaaatgtatcata
aaagagtattgcaaaagagttaatgtaaaaagatctagataa
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