Methanoculleus marisnigri: Memar_0635
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Entry
Memar_0635 CDS
T00477
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K16793
methanogen homoaconitase small subunit [EC:
4.2.1.114
]
Organism
mem
Methanoculleus marisnigri
Pathway
mem00300
Lysine biosynthesis
mem00680
Methane metabolism
mem01100
Metabolic pathways
mem01110
Biosynthesis of secondary metabolites
mem01120
Microbial metabolism in diverse environments
mem01210
2-Oxocarboxylic acid metabolism
mem01230
Biosynthesis of amino acids
mem01240
Biosynthesis of cofactors
Module
mem_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Memar_0635
09105 Amino acid metabolism
00300 Lysine biosynthesis
Memar_0635
Enzymes [BR:
mem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
Memar_0635
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
PepSY_like
zf-C2H2_AcuF
Motif
Other DBs
NCBI-ProteinID:
ABN56568
UniProt:
A3CT68
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All DBs
Position
606718..607188
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AA seq
156 aa
AA seq
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MQGAGPAICLGNDIDTDLIIAGRYLRTKDRSVWAEHAFEDLDPALAPRLSGSVIVAGKNM
GCGSSREQAVVALREAGVVAVVAESFARIFFRNAVNVGLPVIEAPVACTDGARVAFDLDG
GWVEVDGKRYPARPLSEKMVAILRSGGLVPYWRSWR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtgccggaccggcaatctgtctcgggaacgacatcgacaccgacctcatcatc
gccggccgctacctccggacgaaagaccgctcggtctgggcggagcacgccttcgaggac
ctcgacccggcgctcgccccccgcctttcgggatcggtcatcgtcgccggaaagaacatg
ggctgcgggtcgtcccgcgagcaggcggtggtcgccctccgcgaggcgggtgtcgtcgcg
gtcgtcgcggagtcgttcgcccgcatcttctttcggaacgccgtcaacgtcggcctgccg
gtgatcgaggcccccgtcgcctgcaccgacggcgcccgcgtcgccttcgacctcgatggc
gggtgggtcgaggttgacgggaagcgttatcccgctcgcccgctctcggagaagatggtc
gccatcctccggtccggggggctggttccctactggaggtcgtggcgatga
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