Massilia endophytica: LSQ66_02240
Help
Entry
LSQ66_02240 CDS
T09693
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
meny
Massilia endophytica
Pathway
meny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSQ66_02240 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meny03400
]
LSQ66_02240 (nth)
Enzymes [BR:
meny01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LSQ66_02240 (nth)
DNA repair and recombination proteins [BR:
meny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSQ66_02240 (nth)
Prokaryotic type
LSQ66_02240 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UGQ47320
LinkDB
All DBs
Position
complement(470894..471541)
Genome browser
AA seq
215 aa
AA seq
DB search
MNPAKRHEIFRRLREANPKPTTELEYTTPFELLIAVLLSAQATDVGVNKATRRLYPVANT
PQAMLDLGLDELMSYIQTIGLYRTKAKNVLASCQILIDKYGGEVPHDREALESLPGVGRK
TANVVLNTAFGDPTIAVDTHIFRVSNRTNLAPGKNVDIVEQKLMKFVPKEFLQDAHHWLI
LHGRYTCLARKPLCWNCLIVDLCEYKAKTPAPANA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagccaaacgccacgaaatcttccgccgcctgcgcgaagccaatcccaagccc
accaccgaactcgaatacacgaccccgttcgaactgctgattgctgtgctgctctcggcg
caggcgaccgacgtgggcgtcaacaaggccacgcgccgcctctacccggtcgccaacacc
ccgcaggccatgctcgacctcggcctggacgagctgatgagctacatccagaccatcggc
ttataccggacgaaggccaagaacgtgctggccagctgccagatcctgatcgacaagtac
ggcggcgaagtgccgcacgaccgggaagcgctggaaagcctgccgggcgtcggccgcaag
acggcgaacgtggtgctgaacacggcgtttggcgacccgacgattgcggtggacacgcac
atcttccgggtctcgaaccggacgaatctcgcgcccgggaagaatgtcgacatcgtcgag
cagaagctgatgaagttcgtgccgaaagagttcctgcaggacgcccaccactggctgatc
ctgcacggccgctacacctgcctcgcgcgcaagcccctgtgctggaactgcctgatcgtc
gacctctgcgaatacaaagccaaaacccccgcccccgccaacgcctga
DBGET
integrated database retrieval system
