Massilia endophytica: LSQ66_04630
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Entry
LSQ66_04630 CDS
T09693
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
meny
Massilia endophytica
Pathway
meny01501
beta-Lactam resistance
meny01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LSQ66_04630
01503 Cationic antimicrobial peptide (CAMP) resistance
LSQ66_04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
meny03036
]
LSQ66_04630
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_04630
01504 Antimicrobial resistance genes [BR:
meny01504
]
LSQ66_04630
Chromosome and associated proteins [BR:
meny03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LSQ66_04630
Transporters [BR:
meny02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LSQ66_04630
Antimicrobial resistance genes [BR:
meny01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LSQ66_04630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
OEP
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
PDZ_2
Motif
Other DBs
NCBI-ProteinID:
UGQ47765
LinkDB
All DBs
Position
1005691..1006857
Genome browser
AA seq
388 aa
AA seq
DB search
MLRKTLLALAVASALVACGKSGPDKGEGPAASSRAEAKKNATLQVAPEDLVTVQTDSLAS
GPVITGSIEPERKADLRAEVGAVVMQVLKENGEAVRKGDLLVRLDDTSIRDSLTSANEAV
RASQQALDQAERMLKRHQTLLASGMTSAQAMEDAQLRFNNAQSDLVAAKARRATAEQQLA
RTLVRAPFDGIVSDRKVSNGDTAQIGKELIKVIDPNSMRFEGLVSADKIGTVKVGQNVQF
RVNGYPGQTFAGKVKRVDPAANPVTRQVEVLVNFADQVQPKVAGLYAEGRVEAEARDTLM
IPDSSLVRAGDNAYTWRIKDNVLRKADLVVGARDARTGQWEVSKGLAAGDRVLRAPASSF
RDGQKVELVSAKAVASANGSAPAAAKGN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtaagaccctactcgctctcgccgtcgcttcggcgctcgtcgcctgcggcaag
tcaggcccggacaagggggaaggccccgcggcatccagtagggcggaagccaagaagaat
gccaccctgcaggtggcgccggaagacctggtgacggtgcagaccgattccctggcctcc
ggccccgtcatcaccggatccatcgaacccgagcgcaaggccgacctgcgcgccgaagtg
ggcgccgtggtgatgcaggtgctcaaggaaaacggcgaagccgtgcgcaagggcgacctg
ctggtgcgcctggacgacacctcgatccgcgattcgctgacctcggccaacgaggcggtg
cgcgcctcccagcaggccctggaccaggccgagcgcatgctcaagcgccaccagaccctg
ctggcctcgggcatgacctcggcccaggccatggaagacgcccagctgcgcttcaacaat
gcccagagcgacctggtggccgccaaggcgcgccgcgccacggccgaacagcagctggcc
cgcacgctcgtgcgcgcccccttcgacggcatcgtgagcgaccgcaaggtctcgaacggc
gacacggcccagatcggcaaggaactgatcaaggtgatcgacccgaacagcatgcgcttc
gaaggcctggtgtcggccgacaagatcggcaccgtgaaagtgggccagaacgtgcagttc
cgcgtgaacggctacccgggccagaccttcgccggcaaggtgaagcgcgtggacccggcc
gccaaccccgtcacccgccaggtggaagtgctggtgaacttcgccgaccaggtgcagccg
aaagtggccggcctgtacgccgaaggccgcgtggaagcggaagcgcgcgataccctgatg
attcccgattcctccctggtgcgcgccggcgacaacgcctatacctggcgcatcaaggac
aatgtcctgcgcaaggccgacctggtggtgggcgcgcgcgacgcgcgcaccggccagtgg
gaagtgagcaagggcctggccgcgggcgaccgcgtgctgcgcgccccggcatccagcttc
cgcgacggccagaaggtggaactcgtctccgccaaggcggtggcatcggccaacggcagc
gcaccggctgcggcgaaaggaaactaa
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