Massilia endophytica: LSQ66_13970
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Entry
LSQ66_13970 CDS
T09693
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
meny
Massilia endophytica
Pathway
meny00020
Citrate cycle (TCA cycle)
meny00785
Lipoic acid metabolism
meny01100
Metabolic pathways
meny01110
Biosynthesis of secondary metabolites
meny01120
Microbial metabolism in diverse environments
meny01200
Carbon metabolism
meny01210
2-Oxocarboxylic acid metabolism
Module
meny_M00009
Citrate cycle (TCA cycle, Krebs cycle)
meny_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LSQ66_13970
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LSQ66_13970
Enzymes [BR:
meny01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LSQ66_13970
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
UGQ44905
LinkDB
All DBs
Position
complement(3087609..3090464)
Genome browser
AA seq
951 aa
AA seq
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MMQQLTSNSYLFGGNAPYVEELYEAYLANPGSVPDNWRAYFDAMQHVPAVDGSNKPDVAH
ASVIASFAERAKQGPIRTVTASGDAEMGRKRVAATQLIAAYRYLGSRWANLDPLQRQERP
NIPELEPASYGFTDADMDTVFNISNTYFGPETASLRDLTNFLRDTYTRSIGAEFMYISDP
AEKRWLQERLESIRSTPNFTPEKKKHILERLTAAEGLERYLHTKYVGQKRFSLEGGETFI
ASIDEIIQRAGEKGVQEIVIGMAHRGRLNVLVNTLGKAPKDLFEEFEGKHADDLPAGDVK
YHQGFSSDIATAGGPVHLSLAFNPSHLEIVNPVVEGSVKARMDRRGDKAGAQVLPILVHG
DAAFAGQGVVMETLNLAQTRGYGTGGTVHIVINNQIGFTTSDPRDARSTIYCSDVVKMIE
APVLHVNADDPEAVVLASQIALDYRVQFQKDIVVDIICYRKLGHNEQDTPALTQPLMYKK
IAQHPGTRKLYADKLAAQGVIAADGGDQMVAAYRAAMDAGKHTVDPVISNFKNKFAVDWL
PFLNRKWTDAADTAVPLTELKRLATRVTTVPEGFKVHSLVEKVLADRAAMGRGELNLDWG
MGEHLAYASLVSSGYAVRLTGQDAGRGTFTHRHAVLHDQNRERWDAGTYVPLQNISEGQA
PFTVIDSVLSEEAVLGFEYGYSTAEPNTLTIWEAQFGDFVNGAQVVIDQFISSGEVKWGR
ASGLVMLLPHGYEGQGPEHSSARPERFLQLCADNNMQVVQPTTASQIFHLLRRQMVRQFR
KPLVVLTPKSLLRNKDAGSPLAELAKGAFQTVIGEVDEKIDAKKVKRVIACSGKVYYDLA
NARKTRGQTDTAIVRIEQLYPFPHKAFAAELKKFPNATEVVWAQDEPQNQGPWFQIQHNI
FESMESGQRLAYAGRPASASPAVGYYDKHYAQQKELLETAFSKLKGFILTK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcaactcacgtccaactcctacctgtttggtgggaatgcgccgtacgtagaa
gaactctacgaggcgtatctggccaacccaggttccgtgccagacaactggcgcgcctat
ttcgacgccatgcagcacgtgccggccgtcgacggctccaacaaacccgacgtggcccac
gcctccgtgatcgcctccttcgccgaacgcgcgaagcagggcccgatccgcaccgtgacg
gcctcgggcgacgccgaaatgggccgcaagcgcgtggccgccacccagctgatcgccgcc
taccgctacctgggctcgcgctgggccaacctggacccgctgcagcgccaggaacgtccc
aatattcctgagctggagcctgcatcgtacggcttcaccgacgccgatatggacaccgtg
ttcaatatcagcaatacctacttcggtccggagaccgcgtccctgcgcgacctgaccaac
ttcctgcgcgacacctacacccgctccatcggcgccgagttcatgtacatctccgacccg
gccgagaagcgctggctgcaggagcgcctcgagtcgatccgctcgaccccgaacttcacg
cccgagaagaagaagcacatcctggagcgcctgaccgcggccgaaggcctggagcgctac
ctccacaccaagtacgtcggccagaagcgcttctcgctggaaggcggcgagaccttcatc
gcctccatcgacgagatcatccagcgcgccggcgagaagggcgtgcaggaaatcgtgatc
ggcatggcccaccgcggccgcctgaacgtgctggtgaacaccctgggcaaggcgcccaag
gacctgttcgaggagttcgagggcaagcacgccgacgacctgccggctggcgacgtgaaa
taccaccagggcttctcctccgacatcgctaccgcaggcggccctgtgcacctgtcgctg
gcgttcaacccttcccacctggagatcgtgaatccggtggtggaaggctccgtcaaggcc
cgcatggaccgccgcggcgacaaggccggcgcgcaggtgctgccgatcctggtgcacggc
gacgccgccttcgctggccagggcgtcgtgatggaaaccctgaacctggcgcagacccgc
ggctacggcacgggcggcacggttcacatcgtgatcaacaaccagatcggcttcaccacc
tcggatccgcgcgacgcgcgctccaccatctactgctccgacgtcgtgaagatgatcgaa
gccccggtgctgcacgtgaacgccgacgaccctgaagccgtggtgctggcctcgcagatc
gccctggactaccgcgtgcagttccagaaggacatcgtggtcgacatcatctgctaccgc
aaactgggccacaacgagcaggacacgcctgcactgacccagccgctgatgtacaagaag
atcgcccagcacccaggcacccgcaagctgtacgcggacaagctggccgcccagggcgtg
atcgcggccgacggcggcgaccagatggtggccgcctaccgcgccgccatggacgccggc
aagcacacggtcgatccggtcatctcgaacttcaagaacaagttcgccgtggactggctg
cccttcctgaaccgcaagtggaccgacgcggccgataccgccgtgccgctgacggaactg
aaacgcctggccacccgcgtcaccaccgtgccggaaggcttcaaggtgcactccctggtc
gagaaagtgctggccgaccgcgctgccatgggccgtggtgagctgaacctggactggggc
atgggcgaacacctcgcctacgcttccctggtgtcctccggctacgccgtgcgcctgacc
ggccaggacgcgggccgcggcaccttcacccaccgccacgccgtgctgcacgaccagaat
cgcgagcgctgggatgcgggcacctacgtgccgctgcagaacatctccgaaggccaggcg
ccgttcaccgtgatcgactccgtgctgtccgaagaggcggtgctgggcttcgaatacggc
tactcgaccgccgagccgaacaccctgaccatctgggaagcccagttcggcgacttcgtc
aacggcgcccaggtcgtgatcgaccagttcatcagctccggcgaagtgaagtggggccgc
gcctccggcctcgtgatgctgctgccgcacggctacgaaggccagggtccggagcactcc
tccgcacgccccgagcgcttcctgcagctgtgcgcggacaacaatatgcaggtggtgcag
ccgaccaccgcatcgcagatcttccacctgctgcgccgccagatggtgcgccagttccgc
aagccgctggtcgtgctgaccccgaaatcgctgctgcgtaacaaggatgcaggctccccg
ctggccgaactggccaagggcgccttccagaccgtgatcggtgaagtcgacgagaaaatc
gacgccaagaaggtcaagcgcgtgatcgcctgctccggcaaggtgtattacgacctggcc
aacgcccgcaagacccgcggccagaccgataccgccatcgtgcgtatcgagcagctgtac
ccgttcccgcacaaggccttcgccgccgaactgaagaagttcccgaacgcgacggaagtg
gtgtgggcgcaggacgagccgcagaaccagggcccttggttccagatccagcacaacatc
ttcgaatcgatggaatcgggccagcgcctggcgtatgccggccgtcccgcttccgcctcg
ccggctgtcggctactacgacaagcactacgcgcagcagaaagagctgctcgaaacggcg
ttctcgaagctgaagggctttatcctcaccaaataa
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