Massilia endophytica: LSQ66_15425
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Entry
LSQ66_15425 CDS
T09693
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
meny
Massilia endophytica
Pathway
meny01501
beta-Lactam resistance
meny01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LSQ66_15425
01503 Cationic antimicrobial peptide (CAMP) resistance
LSQ66_15425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
meny03036
]
LSQ66_15425
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_15425
01504 Antimicrobial resistance genes [BR:
meny01504
]
LSQ66_15425
Chromosome and associated proteins [BR:
meny03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LSQ66_15425
Transporters [BR:
meny02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LSQ66_15425
Antimicrobial resistance genes [BR:
meny01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LSQ66_15425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
UGQ45183
LinkDB
All DBs
Position
3369048..3370217
Genome browser
AA seq
389 aa
AA seq
DB search
MRSVPRHTSLAFAVITLSLMAACGKKDAPPPAPPPPTVSVITVAPGSVAVTDELPGRVEA
YRIAQVRARTAGIVLKRVFEEGSDVKAGQVLFRIDPAQFQASFESAQAAVSKAEANLAQA
ELKAKRYKPLLAAQAVSQQEYDDAVTAQKQAAADLANARAARTNAGLTLGYATVTSPISG
RVGRALVTEGALVGQGEATPMATVQQLDPIYVTMTQSSTELLRLREALASGKLKSAGKDQ
ARVTLITEDGQQYPATGKLLFSDVAVDESTGSVSLRAEFPNPKRTLLPGMYVRARLEQGV
NEAAITVPQQAIVRGAEGSSVLIVGPDNKVSAQPVKAEASEGNNWVVSSGLKGGERIIVE
GFQKAKPGAPVTPVAWKPAAPATAPAAAK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagatctgtacctcgtcacacttcccttgcattcgcagtcatcaccctgtcgctcatg
gcggcttgcggcaagaaagacgctcctcctccggcaccgcctccccccaccgtttccgtc
attaccgttgctcccggctccgtcgccgtaaccgatgagctgccgggccgcgtggaggct
taccgcatcgcccaggtgcgcgcacggaccgcgggcatcgtgctcaaacgggtattcgag
gaaggcagcgacgtgaaggcgggacaggttttgttccgaatcgacccggcgcagttccag
gcgagcttcgagagcgcccaggcggccgtctccaaggcggaagcgaacctggcgcaggcg
gagctcaaggcgaagcgctacaagcccctgctggcggcgcaggccgtgagccagcaggaa
tatgacgacgcggtgacggcgcagaagcaggcggccgccgacctggcgaatgcccgcgcc
gcccgcaccaatgcgggcctgacgctgggctatgccacggtgacctcgcccatctccggc
cgcgtgggccgcgcgctcgtgaccgagggggcgctggtgggccagggcgaagcgacgccc
atggccacggtgcagcagctggaccctatctatgtgaccatgacccagtcctccaccgag
ctgctgcgcctgcgcgaagcgctggcgagcggcaagctgaaaagcgcgggcaaggaccag
gcgcgcgtgacgctgattaccgaggacggccagcagtatcccgccacgggcaaactgctg
ttctccgacgtggccgtggacgagagcacgggctccgtttccctgcgcgccgagttcccg
aacccgaaacgcaccctgctgccaggcatgtatgtgcgcgcacgcctggaacagggcgtg
aacgaggcggccatcacggtgccgcagcaggccatcgtgcgcggcgcggaaggctcctcg
gtgctgatcgtgggcccggacaacaaggtcagcgcgcagccggtgaaggccgaggcttcc
gaaggcaacaactgggtggtgagttcgggcctgaaaggcggggaacgcatcatcgtcgag
ggcttccagaaagccaagccgggcgctcctgtgacgccggtggcatggaaaccggcagct
cccgccaccgcgcccgcggcggccaagtaa
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