Massilia endophytica: LSQ66_16230
Help
Entry
LSQ66_16230 CDS
T09693
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18903
outer membrane protein, multidrug efflux system
Organism
meny
Massilia endophytica
Module
meny_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_16230
01504 Antimicrobial resistance genes [BR:
meny01504
]
LSQ66_16230
Transporters [BR:
meny02000
]
Other transporters
Pores ion channels [TC:
1
]
LSQ66_16230
Antimicrobial resistance genes [BR:
meny01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
LSQ66_16230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PilO
Motif
Other DBs
NCBI-ProteinID:
UGQ45328
LinkDB
All DBs
Position
complement(3531682..3533115)
Genome browser
AA seq
477 aa
AA seq
DB search
MTKQFQRMTLGAAVAAAVLALSGCATVGSDFKAPANVSETSFRHAPQGAASGARLPAQWW
TVFGDETLNRLEQQALRDNPSVRIAAQRIVQAEAQLGLARASQQPSVNVNAGISNARTSA
NTSQGLALGGRSISGNNFSAGAAFSYELDLLGRVRRAVEAADAQALAAQSDRDGVLLLLS
SQVATAYWQLRGLDAEMAILRGALDTRRETEELVNARFNAGLSNELDTSRAKIERANAEA
DLEEVQRQRNQLEHGLAVLLGALPTTTVLPAVAEAKLPQPPAIPVGVPATVLGHRPDIAS
SVAQLRAANANVGVAEGAFYPSLSLTGNFGFASESLGDLLKSGSRAFSFGPLALSLPVLD
GGRNQANLNIAKSRYEEALANHQSKLLTALREVEDSLSDVQQRQQQAQVQSASREAAERA
YLVARARYERGLSTYLDVTDAQRSALAADRAGVQIGTQRLLASVAVARSLGAGWSAN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaattccaacgcatgactcttggcgcggccgttgccgccgctgtgctggcg
ctgtccggctgcgcgaccgtgggcagcgacttcaaagccccggccaatgtgagcgaaacg
tcgttccgccatgcgccgcagggcgcggccagcggcgcccgcctgcctgcgcagtggtgg
accgtgttcggcgacgagaccctgaaccgcctcgagcagcaggcactgcgcgacaatcca
tccgtgcgcatcgccgcgcagcgcatcgttcaggccgaagcgcagctgggcctcgcgcgc
gccagccagcagccgtcggtgaacgtgaatgcaggcatctcgaatgcccgcacctcggcc
aacacctcgcagggcctggcgctgggcggccgttccatcagcggcaacaacttctcggca
ggcgccgccttctcctatgagctggacctgctgggccgcgtgcgccgcgccgtcgaggcg
gcggacgcgcaggccctggcggcgcagtcggaccgcgacggcgtgctgctgctcctgtcc
tcgcaggtcgccaccgcctactggcagctgcgcggcctggatgcggaaatggccatcctg
cgcggtgcgctggacacgcgccgcgaaacggaagaactggtgaacgcccgcttcaacgcc
ggcctttccaacgagctcgatacttcgcgcgcgaagatcgaacgcgccaatgcggaggcg
gacctggaagaagtgcagcgccagcgcaaccagctggagcacggcctggccgtgctgctg
ggagctttgcccaccactaccgtgctgcccgccgttgcggaagcaaagctgccgcagccg
cctgcgattcccgtgggcgttccggccaccgtgctgggccaccgccccgacatcgcgtcc
agcgttgcgcagctgcgcgcggccaatgcgaacgtgggcgtggcggaaggcgccttctat
ccttcgctcagcctgaccggcaatttcggctttgcttccgagagcctgggcgacctgctg
aaaagcggttcgcgcgccttcagcttcggacccctggccctgtcgctgccggtgctggat
ggcggccgcaaccaggccaacctgaacatcgcgaagtcgcgctacgaggaagcgctggcc
aaccaccagagcaagctgctgacggcgctgcgcgaagtggaagactcgctctccgacgtg
cagcagcggcagcagcaggcgcaggtgcaatcggcctcgcgcgaggcggcggaacgcgcc
tacctggtcgcgcgtgcgcgctacgagcgcggtctttcgacctatctggacgtgaccgat
gcccagcgcagcgccctggcggcggaccgtgcgggcgtgcagatcggcacgcagcgcctg
ctcgcctcggtcgccgtcgcgcgctccctcggcgccggatggtccgctaactga
DBGET
integrated database retrieval system
